Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02142 and BPUM_2762
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:34
# Commandline: needle
# -asequence dna-align/BSNT_02142.1.24716.seq
# -bsequence dna-align/BPUM_2762.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02142-BPUM_2762.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02142-BPUM_2762.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02142
# 2: BPUM_2762
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 249
# Identity: 137/249 (55.0%)
# Similarity: 137/249 (55.0%)
# Gaps: 66/249 (26.5%)
# Score: 316.5
#
#
#=======================================
BSNT_02142 1 GTG-TCAAAGGACAAACAACAGAAGAAG---GCTGTACATACAAAGAGCC 46
||| .||| |||.|| ||.||.|| || ||| |||..|||.
BPUM_2762 1 GTGAGCAA--GACTAA-AAAAGCAG-AGCCCGCT-------CAAGTAGCT 39
BSNT_02142 47 GG----------GAA----GCTCT--ATTTGATACAGCGGATTTGATTAA 80
|| ||| |||.| |||||| ||..||.|...|
BPUM_2762 40 GGCGAAGAAAAAGAATTTGGCTTTTCATTTGA------GGCCTTAAAGGA 83
BSNT_02142 81 GCACGCGAAGGAACTGTTCGGCGTTAAGCCGGATATTCTTCAGGGGGC-- 128
||||...|||||.||.||.||.||.||.||.||.||.|||.|.||.||
BPUM_2762 84 GCACAGTAAGGATCTTTTTGGGGTAAAACCAGAAATCCTTGAAGGTGCTC 133
BSNT_02142 129 ---TTTATTTGGCGTGGATCAACCACGTATGACGAAATCAGAAGCCAA-- 173
|||||.| |....|||||||| ||.||.|||.|||||||.||
BPUM_2762 134 TTTTTTATAT--CAAACATCAACCA---ATTACAAAAACAGAAGCGAAAA 178
BSNT_02142 174 --CCAATTGATTCAAACATTTCTAACCAAGGAGGTCATGTCATCATGA- 219
|..|||||| .|.|||.|..|||||||||| |.|
BPUM_2762 179 AGCACATTGAT----GCTTTTTTGTCCAAGGAGGT----------TTAA 213
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