Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home About Browser Genes Download Publications

Amino acid alignment: BSNT_02144 and BPUM_2761

See DNA alignment / Visit BSNT_02144 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:34
# Commandline: needle
#    -asequence pep-align/BSNT_02144___xkdK.1.24716.seq
#    -bsequence pep-align/BPUM_2761___xkdK.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02144___xkdK-BPUM_2761___xkdK.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02144___xkdK-BPUM_2761___xkdK.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02144___xkdK
# 2: BPUM_2761___xkdK
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 466
# Identity:     308/466 (66.1%)
# Similarity:   364/466 (78.1%)
# Gaps:          18/466 ( 3.9%)
# Score: 1552.5
# 
#
#=======================================

BSNT_02144___      1 MNGGTFTTGKEKERAGIYFNFKTTAQERVSLSERGTVALPVASSWGEAKT     50
                     |||||||.|.||:|.||||||||||::|::|.:|||||||:..||||.||
BPUM_2761___x      1 MNGGTFTPGTEKKRPGIYFNFKTTAEQRITLGDRGTVALPLVMSWGEPKT     50

BSNT_02144___     51 FVSISSVEDLNKKVGLSIDDPSLLLLREAKKNAKTVLMYRLTEGVRASAD    100
                     |:|:|::|||||||||:|||.||||.|||||.|:|||:|||.||..|.|:
BPUM_2761___x     51 FISVSNMEDLNKKVGLNIDDKSLLLFREAKKKAQTVLLYRLNEGEPAKAE    100

BSNT_02144___    101 IAEGVKATAVYGGTKGNDIIIRINQNVLDANSFDVTTYMDESEVDKQTVK    150
                     |:|....||.|||.|||:|.|::.:||||:...||.||:....||||.|.
BPUM_2761___x    101 ISENFVVTANYGGLKGNEITIQVAENVLDSTKRDVITYLGTDIVDKQIVT    150

BSNT_02144___    151 KAEELTANGYVTFTGTGDLSSTIPLTGSEGDTAAETLNASAGIRLSGGTD    200
                     ..::|..|.||.|:|.|:...|                  ||:.||||.:
BPUM_2761___x    151 DVKDLVKNKYVQFSGEGEAVIT------------------AGVALSGGKN    182

BSNT_02144___    201 KAPVNSDYTDFLAAAETESFDVIALPVAEGDQLKATFAAFIKRLRDGQGQ    250
                     .....:|||.||.|||||.||||||||...:|||||||:||:||||.||:
BPUM_2761___x    183 GVASVADYTAFLEAAETEYFDVIALPVDNSEQLKATFASFIERLRDKQGR    232

BSNT_02144___    251 KVQGVTANYAGDYEGIINVTEGVLLEDGTEVTPDKATAWVAGASAGATFN    300
                     |||||.||||.|.|||||||.||:||||||:||.:.|||||||||||.||
BPUM_2761___x    233 KVQGVVANYAADQEGIINVTSGVVLEDGTELTPAQTTAWVAGASAGANFN    282

BSNT_02144___    301 QSLTFVEYGGAVDVLHRLDHDTIVERLGKGEFLFTFDARDKSVSVEKDIN    350
                     ||||||||.||||.|.|||:|.:..||.:|||||||||||::||||||||
BPUM_2761___x    283 QSLTFVEYEGAVDTLERLDNDQVEYRLSQGEFLFTFDARDRTVSVEKDIN    332

BSNT_02144___    351 SLVTFTAEKNKKFAKNKIVRVLDAVNNDLTRELKALIKSRKGSGSDIPAS    400
                     ||.:||||||::.|||||:|||||:|||||.|||.|||.||.:|:|||||
BPUM_2761___x    333 SLTSFTAEKNQQMAKNKIIRVLDAINNDLTFELKNLIKLRKANGNDIPAS    382

BSNT_02144___    401 EDGLQYVKTMITQYMTTLQDAGGITGFDSDEDITISMNEDRDGFLIDLAV    450
                     :||:|.|||:||||:|.|||..|||||:|:.||.|.:|||||||:|||||
BPUM_2761___x    383 DDGVQLVKTLITQYLTQLQDGSGITGFNSETDIVIGLNEDRDGFIIDLAV    432

BSNT_02144___    451 QPVDAAEKFYFNVEVN    466
                     |||||||||||||||.
BPUM_2761___x    433 QPVDAAEKFYFNVEVK    448


#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.