Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02151 and BPUM_2755
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:36
# Commandline: needle
# -asequence pep-align/BSNT_02151___xkdP.1.24716.seq
# -bsequence pep-align/BPUM_2755___xkdP.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02151___xkdP-BPUM_2755___xkdP.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02151___xkdP-BPUM_2755___xkdP.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02151___xkdP
# 2: BPUM_2755___xkdP
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 222
# Identity: 157/222 (70.7%)
# Similarity: 190/222 (85.6%)
# Gaps: 3/222 ( 1.4%)
# Score: 868.0
#
#
#=======================================
BSNT_02151___ 1 MTKSIYEFWISQGKEKLRFPVLPEAIDIANSVQNDSVKITGLGELTFIEE 50
|.||:|:.||||||:||||||||..::|.|:|||::||:...||||||:.
BPUM_2755___x 1 MGKSVYQLWISQGKDKLRFPVLPSELEITNNVQNETVKVASFGELTFIDV 50
BSNT_02151___ 51 PGAKEISFSSFFPKKYTPIAEYQNLPSPENAIAKIEKWMKVKKPVQFLIT 100
|.||::||:|.|||||:||.||:::|||||||||||:.|:.||.|:.::|
BPUM_2755___x 51 PSAKQVSFTSLFPKKYSPIVEYKSIPSPENAIAKIERMMRSKKSVRLIVT 100
BSNT_02151___ 101 GTKINMTCSIESLKYSEGDNEIGDRDFDIVLKEYKTASPRKIKQKKK--- 147
||||||||||||..:.||..:||||:|.|.|||||||||||||:|||
BPUM_2755___x 101 GTKINMTCSIESFTHKEGSYDIGDREFTIELKEYKTASPRKIKRKKKAKQ 150
BSNT_02151___ 148 TKAKRPSKAAPKTYTVKKGDTLWDIAGRFYGNSTQWRKIWNANKTSMIKR 197
||.|||||..||.||||||||||.|:|||||:||:||:||||||.:||||
BPUM_2755___x 151 TKKKRPSKTPPKMYTVKKGDTLWAISGRFYGDSTKWRRIWNANKLAMIKR 200
BSNT_02151___ 198 SKRNIRQPGHWIFPGQKLKIPQ 219
|||||:||||||||||:|||||
BPUM_2755___x 201 SKRNIKQPGHWIFPGQRLKIPQ 222
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