Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02151 and BPUM_2755
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:36
# Commandline: needle
# -asequence dna-align/BSNT_02151___xkdP.1.24716.seq
# -bsequence dna-align/BPUM_2755___xkdP.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02151___xkdP-BPUM_2755___xkdP.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02151___xkdP-BPUM_2755___xkdP.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02151___xkdP
# 2: BPUM_2755___xkdP
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 687
# Identity: 490/687 (71.3%)
# Similarity: 490/687 (71.3%)
# Gaps: 45/687 ( 6.6%)
# Score: 1639.5
#
#
#=======================================
BSNT_02151___ 1 TTGACTAAGTCTATCTATGAATTTTGGATATCACAGGGGAAAGAAAAGCT 50
.||..|||.||..|.|||.||||.|||||.||.||.||.||.||.|||.|
BPUM_2755___x 1 ATGGGTAAATCAGTGTATCAATTGTGGATTTCCCAAGGAAAGGACAAGTT 50
BSNT_02151___ 51 GCGATTCCCTGTTCTTCCTGAAGCGA--TTGATATAGCGAATAGTGTACA 98
||||||||||||.||||| |..||| ||||.||..|.||||..|||||
BPUM_2755___x 51 GCGATTCCCTGTCCTTCC--ATCCGAACTTGAAATCACAAATAACGTACA 98
BSNT_02151___ 99 AAATGACTCAGTAAAGATAACGGGATTGGGTGAACTAACGTTTATTGAAG 148
||||||..|.||||||.|..|....||.||.||||||||.||||||||.|
BPUM_2755___x 99 AAATGAAACGGTAAAGGTTGCCTCTTTTGGAGAACTAACCTTTATTGATG 148
BSNT_02151___ 149 AACC--CGGAGCAAAAGAAATTTCATTTTCTTCTTTTTTTCCAAAAAAGT 196
..|| || ||.||..||.|.|||||..||||.||.|||||.||.||.|
BPUM_2755___x 149 TCCCATCG--GCTAAGCAAGTATCATTCACTTCATTATTTCCTAAGAAAT 196
BSNT_02151___ 197 ATACGCCGATAGCTGAATATCAAAATC-TCCCGTCTCCGGAAAATGCCAT 245
||.||||.||.|.||||||| ||||.| |.||.||.||.||.|||||.||
BPUM_2755___x 197 ATTCGCCAATTGTTGAATAT-AAAAGCATTCCATCACCAGAGAATGCGAT 245
BSNT_02151___ 246 TGCGAAAATTGAA-AAATG----GATGAAGGTAAAAAAGCCTGT-----T 285
.||||||||.||| .|||| ||| .|||.|||.|.|| |
BPUM_2755___x 246 AGCGAAAATAGAACGAATGATGCGAT-----CAAAGAAGTCGGTGCGGCT 290
BSNT_02151___ 286 CAATTTTTAATTACGGGAACAAAAATTAATATGACATGCAGTATTGAAAG 335
|| ||.|| |||||.||||||||.||||||||.||.||.||||||||
BPUM_2755___x 291 CA--TTGTA---ACGGGGACAAAAATCAATATGACGTGTAGCATTGAAAG 335
BSNT_02151___ 336 CCTTAAAT-ATAGTGAGGGAGACA-ATGAAATAGGAGATCGGGATTTTGA 383
|||.|.| |||..||.||| .|| ||||.||.||.|||||.||.|||..
BPUM_2755___x 336 -CTTCACTCATAAAGAAGGA-TCATATGATATTGGCGATCGTGAATTTAC 383
BSNT_02151___ 384 TATTGTGCTAAAAGAATACAAAACCGCTTCCCCGCGGAAAATCAAGCAAA 433
.||.|.|.||||.||||||||||||||.||.||..||||||||||.|.||
BPUM_2755___x 384 GATCGAGTTAAAGGAATACAAAACCGCATCGCCTAGGAAAATCAAACGAA 433
BSNT_02151___ 434 AGAAA-----AAAACAAAGGCA----AAACGTCCGTCGAAGGCTGCGCCG 474
||||| ||||||||.|.| |||.|.||.||.||..|..|.||.
BPUM_2755___x 434 AGAAAAAAGCAAAACAAACGAAAAAGAAAAGGCCTTCAAAAACACCACCA 483
BSNT_02151___ 475 AAGACGTACACAGTGAAAAAGGGAGACACGCTATGGGACATTGCAGGCAG 524
||.|.||||||.||.|||||.||.||.||||||||||.||||.|||||||
BPUM_2755___x 484 AAAATGTACACCGTCAAAAAAGGGGATACGCTATGGGCCATTTCAGGCAG 533
BSNT_02151___ 525 ATTTTACGGGAACAGCACTCAATGGCGCAAAATTTGGAACGCCAATAAAA 574
||||||.||..||||.||..|||||||....||||||||.|||||||||.
BPUM_2755___x 534 ATTTTATGGCGACAGTACAAAATGGCGGCGTATTTGGAATGCCAATAAAT 583
BSNT_02151___ 575 CATCAATGATCAAACGAAGCAAACGGAACATCAGGCAGCCGGGTCACTGG 624
.|.|.|||||.|||||.||||||||.||.||.|.|||||||||.||.|||
BPUM_2755___x 584 TAGCGATGATTAAACGGAGCAAACGCAATATTAAGCAGCCGGGGCATTGG 633
BSNT_02151___ 625 ATTTTTCCCGGCCAAAAATTAAAGATACCGCAATGA- 660
|||||.||.||.||||..|||||.|||||.|||| |
BPUM_2755___x 634 ATTTTCCCTGGACAAAGGTTAAAAATACCACAAT-AG 669
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