Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02152 and BPUM_2754

See DNA alignment / Visit BSNT_02152 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:36
# Commandline: needle
#    -asequence pep-align/BSNT_02152___xkdQ.1.24716.seq
#    -bsequence pep-align/BPUM_2754___yqbQ.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02152___xkdQ-BPUM_2754___yqbQ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02152___xkdQ-BPUM_2754___yqbQ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02152___xkdQ
# 2: BPUM_2754___yqbQ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 336
# Identity:     235/336 (69.9%)
# Similarity:   275/336 (81.8%)
# Gaps:          11/336 ( 3.3%)
# Score: 1231.0
# 
#
#=======================================

BSNT_02152___      1 MIELFVIKDTEWLELVAESVSLEGHRYQAPRSIEATIVTKQGDQTYYSVS     50
                     |||||.|:.....|||.|||:|:|.||||||||:|.|:||||.||||.||
BPUM_2754___y      1 MIELFAIRSGTMYELVTESVTLQGQRYQAPRSIQANIITKQGSQTYYRVS     50

BSNT_02152___     51 EGDTVLFKWKGKELFRGIVFARTPDEHTLAFSAYDMLQYLVKNQDMYVFS    100
                     ||||||||||||||||||||:|||.|..|.|:|||||||||||||:||||
BPUM_2754___y     51 EGDTVLFKWKGKELFRGIVFSRTPVEGKLTFTAYDMLQYLVKNQDVYVFS    100

BSNT_02152___    101 NQRADQIIRRIASDFQIPTTSIANTGHTIKSLVIKNDTTLYDIILKALKQ    150
                     .||||||:|||.:|||||.||||||||.|||||.||||:|||:||||||:
BPUM_2754___y    101 KQRADQILRRIGADFQIPMTSIANTGHVIKSLVFKNDTSLYDMILKALKE    150

BSNT_02152___    151 TKSQTGRHYQLYSEKGKLGLRAWPDPSEVWVLETGVNITGYQYSTSINDT    200
                     ||.||||:||:||.|||:||||||||.:|||:|:|||:..|||||||.:|
BPUM_2754___y    151 TKRQTGRNYQIYSAKGKMGLRAWPDPEDVWVIESGVNLIDYQYSTSIEET    200

BSNT_02152___    201 ATRVVLRRQKD--NKTYKASAK--------DSSGLNKYGVLQYTETVTDD    240
                     ||||.||...|  .|..|..:|        |.:|.:|||:||:.||||..
BPUM_2754___y    201 ATRVKLRTSADEQGKNKKKGSKSEIVVVEQDKAGQSKYGILQHVETVTGQ    250

BSNT_02152___    241 INQAQLQQRADVRLAEKKGVKKELKNIQAVGIPEVQSGLPVYISIPEAGI    290
                     |||.|||:||.||||||||||:|:|:|||:||||:|||||:|:.|||..:
BPUM_2754___y    251 INQPQLQKRAKVRLAEKKGVKQEVKSIQALGIPELQSGLPIYLKIPEINV    300

BSNT_02152___    291 KKTYWVDTDRHEFKGTKHTMTIDVVEKNTMPEGVS-    325
                     |||||:|.|:|||.|.||||||||||||::|:|.. 
BPUM_2754___y    301 KKTYWIDQDKHEFSGVKHTMTIDVVEKNSIPKGDQA    336


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