Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02153 and BPUM_2753

See DNA alignment / Visit BSNT_02153 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:36
# Commandline: needle
#    -asequence pep-align/BSNT_02153___xkdR.1.24716.seq
#    -bsequence pep-align/BPUM_2753___xkdR.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02153___xkdR-BPUM_2753___xkdR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02153___xkdR-BPUM_2753___xkdR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02153___xkdR
# 2: BPUM_2753___xkdR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 88
# Identity:      52/88 (59.1%)
# Similarity:    68/88 (77.3%)
# Gaps:           0/88 ( 0.0%)
# Score: 267.0
# 
#
#=======================================

BSNT_02153___      1 MRLSEAIKHLAVGAVDAESPVELLPAEVVSVSPVEIKLKENSKLIIPEDA     50
                     ||||||||.|||.||||.||::|:..||.:||||.|:|.:|.||||||:.
BPUM_2753___x      1 MRLSEAIKRLAVNAVDAASPIDLVVGEVTAVSPVSIRLNDNHKLIIPEEL     50

BSNT_02153___     51 IIIPKRMQSGGDDALEPGDRLMTAALTGGQSFFILDKV     88
                     :|.|||:..|.:|.|:.||.:|..|:.|||||:|:||:
BPUM_2753___x     51 LIWPKRLNKGEEDELKRGDSIMVLAMAGGQSFYIIDKL     88


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