Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02156 and BPUM_2750
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:36
# Commandline: needle
# -asequence pep-align/BSNT_02156___xkdU.1.24716.seq
# -bsequence pep-align/BPUM_2750___xkdU.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02156___xkdU-BPUM_2750___xkdU.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02156___xkdU-BPUM_2750___xkdU.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02156___xkdU
# 2: BPUM_2750___xkdU
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 312
# Identity: 96/312 (30.8%)
# Similarity: 131/312 (42.0%)
# Gaps: 125/312 (40.1%)
# Score: 483.0
#
#
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BSNT_02156___ 1 MSKQDDMRAYLPPFLTSLKEMAELLKAEAPEFDKQNDSIFDLTDQLFVPT 50
|||||:|:.||||:.|.:.|:..|||.|||||::.::|:||||||.|..|
BPUM_2750___x 1 MSKQDEMKNYLPPYFTEIYEVDHLLKTEAPEFEQLDESVFDLTDQFFPLT 50
BSNT_02156___ 51 ATWGLSRWEKILNVPRESGDTDEIRRLRLISKMSNIPPITYRAIEQAVNR 100
|||||:|||::|.|.|||.|:.|:||.||::.|||||||||.::|::|||
BPUM_2750___x 51 ATWGLNRWERMLKVQRESDDSIELRRARLLNMMSNIPPITYLSLEKSVNR 100
BSNT_02156___ 101 FLKNPSAQVRLLPGEYRFNVDINVDDLQHMNELIEAIENMKPAHLAYTLR 150
|||||||.:||....|.|.:.:|:||||:...:::.:|.:||||||||..
BPUM_2750___x 101 FLKNPSAIIRLTTNRYHFALRVNLDDLQNTRYIVDILETLKPAHLAYTFT 150
BSNT_02156___ 151 GGLNETLQIKDTVILNHRRYRTASELKVGY---SVTLNNNEVVLT----- 192
...:..:..| |....|.....:||: ...|.|.|.||.
BPUM_2750___x 151 AFHHTDVHEK-----NEHHVRLTLRSRVGFFDHIPILLNGEFVLNGTFYL 195
BSNT_02156___ 192 -------------------------------------------------- 192
BPUM_2750___x 196 SGTRGTAEVPTRFRHSLKLRMPLQHSTENAYRMNYVMTGAVHETKQGAAF 245
BSNT_02156___ 192 -------------------------------------------------- 192
BPUM_2750___x 246 TVRTKNQLQQQTKKKMTFRLPVHVQTEQGGSLLIKNHYWILDGSVPLDGS 295
BSNT_02156___ 192 ------------ 192
BPUM_2750___x 296 KMLAATSQKIEL 307
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