Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02160 and BPUM_2748
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:36
# Commandline: needle
# -asequence pep-align/BSNT_02160___xkdV.1.24716.seq
# -bsequence pep-align/BPUM_2748.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02160___xkdV-BPUM_2748.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02160___xkdV-BPUM_2748.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02160___xkdV
# 2: BPUM_2748
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 701
# Identity: 175/701 (25.0%)
# Similarity: 208/701 (29.7%)
# Gaps: 423/701 (60.3%)
# Score: 945.0
#
#
#=======================================
BSNT_02160___ 1 MAYEEKTDWLPDDPINEDDVNRWEKGIKDAHTDLAAHKNDMNNPHNTTKA 50
BPUM_2748 0 -------------------------------------------------- 0
BSNT_02160___ 51 QIGLGNVDNVQQAAKKDFDKHEQDQVRHITSTERENWNAKETPGEAQNKA 100
BPUM_2748 0 -------------------------------------------------- 0
BSNT_02160___ 101 DQAEANAKAYTDSFAARRDNPNQVTKAQVGLGNVENVKQASQADFDAHLS 150
BPUM_2748 0 -------------------------------------------------- 0
BSNT_02160___ 151 NTKVHVSEGERNKWNAAQLIKLTGDDGKRIQLQDGTDILTLSSGFYCAVG 200
BPUM_2748 0 -------------------------------------------------- 0
BSNT_02160___ 201 QSVVNNPVEGDATWYNYDIVEGGSGRKTIVAYQSWGSMMWIGMVHTDGEF 250
BPUM_2748 0 -------------------------------------------------- 0
BSNT_02160___ 251 RGWKQIATTDFIDRVQSELDIHKNDKTNPHSVTKQQVGLGNVENVKQETP 300
BPUM_2748 0 -------------------------------------------------- 0
BSNT_02160___ 301 DGAQKKADTALNQSKDYTNSTAFITRPLNSITDANDLNLPPGTYRLDTNY 350
BPUM_2748 0 -------------------------------------------------- 0
BSNT_02160___ 351 MNANPELQNQFPLNDNRTGLLIIYPSANKWATRQDWFSISTKTLYTRVAV 400
BPUM_2748 0 -------------------------------------------------- 0
BSNT_02160___ 401 NGTEYTDWYILETSEGSQSKADKALADAKN-YVD-------------SNY 436
.:.......||| |||.|:..| .|| :..
BPUM_2748 1 --MDIKSPLPFETS-------DKAHANLFNRMVDTLVENDNALSKRIAGI 41
BSNT_02160___ 437 TNNKLTVLTGSNAIQDARTSGNEYPAGLTFMDIGANNTTGYPLTYGIVKN 486
||..|.:|||..|||||..||.:||.|:||||||..|.||||..||.|||
BPUM_2748 42 TNESLFILTGDQAIQDASVSGEQYPNGITFMDIGQANDTGYPTRYGFVKN 91
BSNT_02160___ 487 EKYSNYRFAQYFYGTGNESNSYFTSTGSWIRHWWSDSGWTAWHKISGFAH 536
||.||:||.||:||||||:.|||.|||:|.||||:.||||.|||:|||.|
BPUM_2748 92 EKISNFRFVQYYYGTGNEAGSYFDSTGTWCRHWWTGSGWTDWHKLSGFLH 141
BSNT_02160___ 537 ANIGTTGKQQLIKGELQKVKYNRKIKDSHNTFDTKNNRFIVPNDGMFLVN 586
.||||||||.|...|.||:.:|||||||||.||.|.:|||.|.:||:|||
BPUM_2748 142 TNIGTTGKQLLNNAERQKILFNRKIKDSHNNFDIKTSRFICPENGMYLVN 191
BSNT_02160___ 587 AGLYIENYQRYVNYELDIYLNGVRYKNIAHYRANPGDQSDTTEINVGLYG 636
||:|||..|.|.|:||.|:|||..||||:|||..|...|:|.::|:||||
BPUM_2748 192 AGVYIETVQMYANFELSIFLNGKNYKNISHYRHLPATPSETAKLNIGLYG 241
BSNT_02160___ 637 AATVPANQGDYIEIYLYVGYNGGTTRYTTESSGWYNYFDITEIGGRNYPR 686
||.||||:||.||||:|:||.|.:.||.:::.|||||||||||||||:||
BPUM_2748 242 AANVPANKGDNIEIYMYIGYAGNSDRYISDNPGWYNYFDITEIGGRNFPR 291
BSNT_02160___ 687 T 687
.
BPUM_2748 292 V 292
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