Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02162 and BPUM_2746

See DNA alignment / Visit BSNT_02162 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:36
# Commandline: needle
#    -asequence pep-align/BSNT_02162___xkdX.1.24716.seq
#    -bsequence pep-align/BPUM_2746.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02162___xkdX-BPUM_2746.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02162___xkdX-BPUM_2746.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02162___xkdX
# 2: BPUM_2746
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 57
# Identity:      25/57 (43.9%)
# Similarity:    39/57 (68.4%)
# Gaps:           3/57 ( 5.3%)
# Score: 151.0
# 
#
#=======================================

BSNT_02162___      1 MNYWVLALYYEWATADMVKQALAYKDCSIEDLAEGVNKKLITADQYKEIT     50
                     |||||:|||::|.|.::||||:...|||:|||.||..::::|.:|.:|:.
BPUM_2746          1 MNYWVMALYFKWVTPELVKQAVELGDCSMEDLNEGYEQRMLTLEQLQEMN     50

BSNT_02162___     51 GKAM---     54
                     ....   
BPUM_2746         51 PSIKARK     57


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