Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02162 and BPUM_2746
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:37
# Commandline: needle
# -asequence dna-align/BSNT_02162___xkdX.1.24716.seq
# -bsequence dna-align/BPUM_2746.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02162___xkdX-BPUM_2746.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02162___xkdX-BPUM_2746.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02162___xkdX
# 2: BPUM_2746
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 189
# Identity: 112/189 (59.3%)
# Similarity: 112/189 (59.3%)
# Gaps: 39/189 (20.6%)
# Score: 297.0
#
#
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BSNT_02162___ 1 ATGAATTATTGGGTGCTTGCCCTCTATTATGAGTGGGCGACAGCAGATAT 50
||||||||||||||..|.||..|.||||.|.|.||||.|||..|.||..|
BPUM_2746 1 ATGAATTATTGGGTAATGGCATTATATTTTAAATGGGTGACCCCTGAATT 50
BSNT_02162___ 51 GGTAAAACAAGCATTAGCATATAAA------GACTGTTCAATTGAGGATC 94
|||.|||||||||.|.| || ||.||||||||.||.|||.
BPUM_2746 51 GGTCAAACAAGCAGTCG------AACTAGGTGATTGTTCAATGGAAGATT 94
BSNT_02162___ 95 TGGCAG-AGGGTGTGAACAAAAAGCTGATCACAGCT-GACCAGTATAAAG 142
|....| |||.|.|||.| |||.|.||.|||| .|| ||.||||...|||
BPUM_2746 95 TAAATGAAGGATATGAGC-AAAGGATGCTCAC-TCTAGAGCAGTTGCAAG 142
BSNT_02162___ 143 AAATTA--CCGGTAAAGC-------CATGTAG------- 165
||||.| || |||| || ||
BPUM_2746 143 AAATGAACCC----AAGCATCAAAGCA---AGGAAATGA 174
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