Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04561 and BPUM_2733
See
DNA alignment /
Visit
BSNT_04561 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:05
# Commandline: needle
# -asequence pep-align/BSNT_04561___yuaE.1.24716.seq
# -bsequence pep-align/BPUM_2733___yuaE.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04561___yuaE-BPUM_2733___yuaE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04561___yuaE-BPUM_2733___yuaE.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04561___yuaE
# 2: BPUM_2733___yuaE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 172
# Identity: 83/172 (48.3%)
# Similarity: 119/172 (69.2%)
# Gaps: 12/172 ( 7.0%)
# Score: 447.0
#
#
#=======================================
BSNT_04561___ 1 ---------MMSIFNEARLETWNELKGLSDEKLNQKPSAEEWSIREVLDH 41
.||:.::||.|.|.||:||::|:||||.|.:.|||:||.||
BPUM_2733___y 1 MLKFDLEVMKMSLLHDARQELWQELQGLNEEQLNQKLSDDTWSIQEVADH 50
BSNT_04561___ 42 LKKIDMTAQKMLKERVKDAPIKEIEEKSLEVAQDRNNKRKAPSHLEPAHD 91
|||:|:.|.|.|....|.|||||.|.|.:|:|:||:.|..|||.:||...
BPUM_2733___y 51 LKKMDLVAAKHLAAEGKKAPIKEYEPKPVEMAEDRSRKATAPSIVEPERK 100
BSNT_04561___ 92 FISGSQMKRELDVVREQLTAAIASLKEEDFERVLPHPVFQELTVRQWIDF 141
.::.:.:|.|||..||||...:::..|:||:||:.||||:||:::|::||
BPUM_2733___y 101 HVTPTHLKDELDTAREQLNQILSTFTEDDFKRVIAHPVFEELSLKQYLDF 150
BSNT_04561___ 142 IGHHEKRHLSQMKEIKEKIERA 163
||.|||||:.|:|||||::
BPUM_2733___y 151 IGAHEKRHIHQIKEIKEQL--- 169
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.