Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04558 and BPUM_2727
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:04
# Commandline: needle
# -asequence pep-align/BSNT_04558___yuaI.1.24716.seq
# -bsequence pep-align/BPUM_2727.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04558___yuaI-BPUM_2727.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04558___yuaI-BPUM_2727.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04558___yuaI
# 2: BPUM_2727
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 187
# Identity: 85/187 (45.5%)
# Similarity: 115/187 (61.5%)
# Gaps: 17/187 ( 9.1%)
# Score: 416.0
#
#
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BSNT_04558___ 1 MVTVREAKLEDIKDIAKVHVDSWRTTYHEIIPIDYLNSLNYKEFEDKWKS 50
:.||.|..:||..||::||.||:|||..||..|||:.|..:|.|:.|:.
BPUM_2727 1 -MKVRHAVQQDIPKIAEIHVKSWQTTYQGIINQDYLDGLKIEEREESWRR 49
BSNT_04558___ 51 RSLKGVFVAQDEMDSVFGFASFGPIRSEQ-EGYDGELYAIYLLEERQRQG 99
.||:|.|||:| .:.||||||||..|.|: ..|||||||||||:::||.|
BPUM_2727 50 MSLEGTFVAED-AEGVFGFASFGKQRDERYPTYDGELYAIYLLQKKQRSG 98
BSNT_04558___ 100 AGRALLAKGAEYLLQHGFSSMFVWVIEQNPSIIFYQAYSPERVAEDNFEI 149
||.||:|:|..||::.|:.::.:||.|||.:..|||...|..|....||:
BPUM_2727 99 AGIALIAEGVRYLIEKGYQNILLWVFEQNSAKHFYQKLQPHFVVTSQFEL 148
BSNT_04558___ 150 AGVRLKEVGLGWPDLSALKTLLNR------------- 173
||.:..|:|.|| :|..|...|:|
BPUM_2727 149 AGEKHDEIGYGW-ELLVLNDHLHRIKSSASNNNERKM 184
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