Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05887 and BPUM_2720

See DNA alignment / Visit BSNT_05887 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:27
# Commandline: needle
#    -asequence pep-align/BSNT_05887___menA.1.24716.seq
#    -bsequence pep-align/BPUM_2720___menA.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05887___menA-BPUM_2720___menA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05887___menA-BPUM_2720___menA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05887___menA
# 2: BPUM_2720___menA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 312
# Identity:     175/312 (56.1%)
# Similarity:   227/312 (72.8%)
# Gaps:          18/312 ( 5.8%)
# Score: 914.0
# 
#
#=======================================

BSNT_05887___      1 -----------------MGQILWQLTRPHTLTASFVPVLLGTVLAMFYVK     33
                                      ..:|.|.|.|||||||:|:||.||||||:...:
BPUM_2720___m      1 MQHQSISDQLSPIKPDKNWRIWWNLLRPHTLTAAFIPVTLGTVLALPSGQ     50

BSNT_05887___     34 VDLLLFLAMLFSCLWIQIATNLFNEYYDFKRGLDTAESVGIGGAIVRHGM     83
                     :.:.|||||||:.::||||||:||||:||.||||..:||||||||||:|:
BPUM_2720___m     51 IHVGLFLAMLFASMFIQIATNMFNEYFDFVRGLDNEKSVGIGGAIVRNGV    100

BSNT_05887___     84 KPKTILQLALASYGIAILLGVYICASSSWWLALIGLVGMAIGYLYTGGPL    133
                     ||||:|.||.|.:.:::|||||||..||||:|||||:.||.||.|||||:
BPUM_2720___m    101 KPKTVLGLAYALFALSLLLGVYICMMSSWWIALIGLICMAAGYFYTGGPV    150

BSNT_05887___    134 PIAYTPFGELFSGICMGSVFVLISFFIQTDMINTQSILISIPIAILVGAI    183
                     ||||||||||.||..||...:||||:|||..:.::::|:|:||:||||||
BPUM_2720___m    151 PIAYTPFGELVSGAFMGLGIILISFYIQTGTLTSKAVLVSLPISILVGAI    200

BSNT_05887___    184 NLSNNIRDIEEDKKGGRKTLAILMGHKGAVTLLAASFAVAYIWVVGLVIT    233
                     .|||||||::.||:.||||||||.|.|.||.:|.:.|.::|:.:...:.|
BPUM_2720___m    201 LLSNNIRDLDGDKENGRKTLAILAGRKAAVNILLSMFLISYVLIFVYIFT    250

BSNT_05887___    234 GAASPWLFVVFLSVPKPVQAVKGFVQKEMPMNMIVAMKSTAQTNTFFGFL    283
                     .....|..:|.|||||...|:|.|.|||.|:.::.|||||||||||||||
BPUM_2720___m    251 DIVGLWSLLVLLSVPKAYTAIKEFKQKEKPIELMNAMKSTAQTNTFFGFL    300

BSNT_05887___    284 LSIGLLISYFR-    294
                     |:|.|::.|:. 
BPUM_2720___m    301 LTIALILQYYIA    312


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