Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04486 and BPUM_2719
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:03
# Commandline: needle
# -asequence pep-align/BSNT_04486___menF.1.24716.seq
# -bsequence pep-align/BPUM_2719___menF.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04486___menF-BPUM_2719___menF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04486___menF-BPUM_2719___menF.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04486___menF
# 2: BPUM_2719___menF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 489
# Identity: 274/489 (56.0%)
# Similarity: 357/489 (73.0%)
# Gaps: 20/489 ( 4.1%)
# Score: 1469.0
#
#
#=======================================
BSNT_04486___ 1 MYGIKSILRIMEECLMVTTVQRTFRKEVLHALHKAKEVNHAVLISYSRQI 50
||||||.|||:|.|..|.:|..|||||||||||::
BPUM_2719___m 1 ---------------MVTTVQSTFRQEALATLEEANNVNHAVLISYSRRV 35
BSNT_04486___ 51 ESLDPLSFFNYGAKKYTGNRFFWSDPESELTIVGLGKEAVFQTNQKNSER 100
:.||||:||..|...:.|.|||||||||::...|||:.||.:::::..||
BPUM_2719___m 36 DDLDPLAFFQSGEADFLGERFFWSDPESQMIFSGLGRAAVIKSSEQGKER 85
BSNT_04486___ 101 YREVFEQWERFKKTAFHIYEEEKLQHSAVGPVLFGGFSFDPCEERGSQWD 150
:..|.::||:.|:..||.::|::|:.:||||:|||||||||.||:...|:
BPUM_2719___m 86 FDTVHQEWEQLKQHMFHFHDEKELRQAAVGPLLFGGFSFDPYEEKARHWE 135
BSNT_04486___ 151 HFSEGDFFVPALMLTMTAEGPFLTVNRWVSGGEDAEAVLEGLKAFAAEFM 200
.|.|..||||::|||::.||.|||:|.|.....:...:::.|:..|::|.
BPUM_2719___m 136 AFGEAHFFVPSMMLTVSKEGTFLTINEWKQVDGNVHQLIQELEQKASQFK 185
BSNT_04486___ 201 VPDFKQEDQAVIAAAEELDKDDWLKAIETATSQIKEKQYDKVVLARELLL 250
....:.:.||.:...||||.::|:|||:.||..|:..:|:|||||||:||
BPUM_2719___m 186 TLPLRYDGQAELVHMEELDVNEWMKAIQEATDHIRANEYEKVVLAREVLL 235
BSNT_04486___ 251 TFDGPIQIEPVLKTLLDDQQTSYVFAIEQEGKTFVGASPERLIKRDGGTV 300
.:...|::.|:|..||..|.||||||:||..:.||||:||||:|:.||.|
BPUM_2719___m 236 HYKNQIELAPLLSALLKHQTTSYVFAVEQGRQAFVGATPERLVKKSGGEV 285
BSNT_04486___ 301 MSSCLAGSIKRGVNEEDDRRIGLELLNDEKNLLEHDIVVGMIHNAFVSSC 350
.||||||||.||.|||:|:.:|.|||:|||||:||.|||.||..||.::|
BPUM_2719___m 286 FSSCLAGSIVRGKNEEEDKALGEELLHDEKNLIEHQIVVNMIEQAFEANC 335
BSNT_04486___ 351 SEVEKPDGPVLYKTKSVQHLFTPIVGQLRESASIFDLIEKLHPTPALGGA 400
..|.||:.|.|||||::|||||||||:::.|.|:|.|||:|||||||||.
BPUM_2719___m 336 LRVHKPNQPSLYKTKNIQHLFTPIVGEIKNSCSLFSLIEQLHPTPALGGY 385
BSNT_04486___ 401 PQEKAVDVIREIEPMSRGWYAAPIGWIDSQDNGEFAVAIRSGLIEGSTAR 450
|:||||:|||||||:.|||||||:|||||||||||||||||||||....|
BPUM_2719___m 386 PKEKAVEVIREIEPLKRGWYAAPVGWIDSQDNGEFAVAIRSGLIEEDHVR 435
BSNT_04486___ 451 LFAGCGIVEDSEPISEYEETQIKLKPMISALGG---ERR 486
|||||||||||....||||||:||:||:||||| |
BPUM_2719___m 436 LFAGCGIVEDSLAKQEYEETQVKLRPMLSALGGCPIE-- 472
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