Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04479 and BPUM_2714
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:02
# Commandline: needle
# -asequence pep-align/BSNT_04479___menC.1.24716.seq
# -bsequence pep-align/BPUM_2714___menC.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04479___menC-BPUM_2714___menC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04479___menC-BPUM_2714___menC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04479___menC
# 2: BPUM_2714___menC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 374
# Identity: 256/374 (68.4%)
# Similarity: 323/374 (86.4%)
# Gaps: 3/374 ( 0.8%)
# Score: 1448.0
#
#
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BSNT_04479___ 1 MIEIEKITLYHLSMNLKKPFKNSIETLQERKFLIVEAIDTTGVTGWGEVS 50
||:||::||||::|.||:||..|:.|:.:|:|:|||..|.||:|||||||
BPUM_2714___m 1 MIQIERVTLYHVTMKLKQPFTTSLGTISDREFIIVEVKDQTGLTGWGEVS 50
BSNT_04479___ 51 AFSSPWYTEETIGTCLHMLKDFFIPNVVGREFNHPSEVPDSLARYKGNRM 100
||||||||||||.||.|||:.||||||:.|.|.|||::||||.::|||||
BPUM_2714___m 51 AFSSPWYTEETIETCYHMLRAFFIPNVLTRTFTHPSDIPDSLYQFKGNRM 100
BSNT_04479___ 101 AKAGLESAVWDIYAKKKGVSLAEALGGTRDKVPAGVVVGLAPLDDMLKEI 150
||||:|:||||||||::..||.:.||||:|::|:|||.||.|:|||||:|
BPUM_2714___m 101 AKAGIEAAVWDIYAKRENKSLRDVLGGTKDRIPSGVVAGLGPVDDMLKQI 150
BSNT_04479___ 151 ESYQKEGYQRIKIKIQPGQDVELVKAIRSRFPNIPLMADANSSYELKDIS 200
:.:..:||||:|:||:||||:.|:|.||..||::||||||||:|||||||
BPUM_2714___m 151 QQFVDQGYQRVKVKIKPGQDIGLLKKIRESFPHLPLMADANSAYELKDIS 200
BSNT_04479___ 201 RLKELDDYHLMMIEQPLQADDIVDHRHLQKHLKTAICLDESICSVDDARR 250
:||:|||..|:||||||.||||||||||||||||.|||||||||:||||:
BPUM_2714___m 201 KLKQLDDIRLLMIEQPLAADDIVDHRHLQKHLKTPICLDESICSLDDARK 250
BSNT_04479___ 251 AIELGSCKIINIKPSRVGGLTEALKIHDLCKEHHMQVWCGGMLETGISRA 300
|:|||||:|||:|||||||||||||||...|||.:.:|||||:|||||||
BPUM_2714___m 251 AVELGSCQIINVKPSRVGGLTEALKIHTFSKEHQIPLWCGGMVETGISRA 300
BSNT_04479___ 301 QNVALASLPQFTIPGDISSSSRYWDEDIVTPDIRIDNGFISVSKQPGLGV 350
||||||||||||||||||:||:||::||:.|:|:::||||.|.:.||:||
BPUM_2714___m 301 QNVALASLPQFTIPGDISASSKYWEQDIIYPEIKVENGFIEVPRSPGMGV 350
BSNT_04479___ 351 EVNQDIMRKYVTKMDVFTQHG--- 371
||:...:|.:..|:||||:|.
BPUM_2714___m 351 EVDYQALRSFSDKIDVFTKHDFVM 374
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