Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04470 and BPUM_2711

See DNA alignment / Visit BSNT_04470 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:02
# Commandline: needle
#    -asequence pep-align/BSNT_04470___ythB.1.24716.seq
#    -bsequence pep-align/BPUM_2711.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04470___ythB-BPUM_2711.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04470___ythB-BPUM_2711.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04470___ythB
# 2: BPUM_2711
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 350
# Identity:     250/350 (71.4%)
# Similarity:   302/350 (86.3%)
# Gaps:           4/350 ( 1.1%)
# Score: 1333.5
# 
#
#=======================================

BSNT_04470___      1 --MEISTDALIAISIIWGFVFIYAVMATMDFGAGFWSMIYLNKEHMKATD     48
                       |:::|||||||:|:|||||||||||:||||||||||||:|||..||.:
BPUM_2711          1 MQMDVTTDALIAITILWGFVFIYAVMASMDFGAGFWSMIYMNKEQTKAAN     50

BSNT_04470___     49 IANRFLSPTWEVTNVFIVAIVVALFSFFPGATFVLGTVLLIPGSMILLLL     98
                     |||::|||||||||||||||||||||.|||||||||||||||||:|||||
BPUM_2711         51 IANKYLSPTWEVTNVFIVAIVVALFSMFPGATFVLGTVLLIPGSIILLLL    100

BSNT_04470___     99 AIRSGFLVFSNT--AKERKTLRYISGISGFIIPAILILVLPVTHGGFIEK    146
                     |:||||||||::  .|.||.:.|||||||||||:|||:|||:||||||.|
BPUM_2711        101 ALRSGFLVFSHSLPKKYRKAVTYISGISGFIIPSILIMVLPITHGGFIFK    150

BSNT_04470___    147 TDGIYNLNMSKIFSSPNAYSFIGFAILSTLFLSSLLLADVSNVAEEQDAY    196
                     .:..|:|::..:|:|.|.|||:||||.||||||||||||.||||:|.:||
BPUM_2711        151 QNNNYSLDLGLVFTSANVYSFVGFAIFSTLFLSSLLLADFSNVADEDEAY    200

BSNT_04470___    197 RAYRKSALITGPISLLFAVCIMVTMRNEANWLYSGMMNDFTWIIASFITF    246
                     ..|||.||||||:||:.|..||:|:|:|||||::.||.:|..::.|.:.|
BPUM_2711        201 SIYRKGALITGPLSLMMAFFIMLTLRSEANWLFTKMMQNFPILLVSLLMF    250

BSNT_04470___    247 VIAGIALFLPNKSFGQNIGKPRLALVAIGIQYFLASYAYGRAHLPYMIYP    296
                     ::||:||||||..|....|:||||::||.||||||||.|||||||||.||
BPUM_2711        251 LLAGLALFLPNSRFKHRKGRPRLAVIAITIQYFLASYVYGRAHLPYMAYP    300

BSNT_04470___    297 DVTVMSGFTEPATFRALFATYIVAFIILFPGFFFFWKMFMRDKRYIRQEE    346
                     |:|:|||||:|.||||||.||||.||||||||:|||::||:||||||||:
BPUM_2711        301 DITIMSGFTDPVTFRALFITYIVGFIILFPGFYFFWRLFMKDKRYIRQED    350


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