Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04468 and E2

See DNA alignment / Visit BSNT_04468 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:01
# Commandline: needle
#    -asequence pep-align/BSNT_04468___rpmE2.1.24716.seq
#    -bsequence pep-align/BPUM_2709___rpmE2.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04468___rpmE2-BPUM_2709___rpmE2.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04468___rpmE2-BPUM_2709___rpmE2.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04468___rpmE2
# 2: BPUM_2709___rpmE2
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 82
# Identity:      63/82 (76.8%)
# Similarity:    68/82 (82.9%)
# Gaps:           2/82 ( 2.4%)
# Score: 349.0
# 
#
#=======================================

BSNT_04468___      1 MKEGIHPKNHKVIFQDVNSGYRFLSTSTKTSNETAEWEDGNTYPVIKVEV     50
                     ||..|||.:|:|:|.||||||||||.|||:||||.|||||.||||||||.
BPUM_2709___r      1 MKRDIHPTSHEVVFMDVNSGYRFLSKSTKSSNETVEWEDGKTYPVIKVET     50

BSNT_04468___     51 SSDTHPFYTGRQKFNEKGGRVEQFKKRYNMGK     82
                     ||||||||||||||.|||||.|.|||:|.|  
BPUM_2709___r     51 SSDTHPFYTGRQKFGEKGGRAELFKKKYQM--     80


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