Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04460 and BPUM_2701

See DNA alignment / Visit BSNT_04460 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:01
# Commandline: needle
#    -asequence pep-align/BSNT_04460___ytkC.1.24716.seq
#    -bsequence pep-align/BPUM_2701___ytkC.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04460___ytkC-BPUM_2701___ytkC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04460___ytkC-BPUM_2701___ytkC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04460___ytkC
# 2: BPUM_2701___ytkC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 134
# Identity:      74/134 (55.2%)
# Similarity:   104/134 (77.6%)
# Gaps:           0/134 ( 0.0%)
# Score: 393.0
# 
#
#=======================================

BSNT_04460___      1 MDRDFGIFSFLAVSVSAAGFFFGGFQYSFLILLSLMAIEFISTTLKETII     50
                     |.:|.||||...||:||.||.|||..|..:||::|||||.|.::|:|::.
BPUM_2701___y      1 MSKDLGIFSLFTVSLSAMGFLFGGAGYLLMILVTLMAIELICSSLRESLT     50

BSNT_04460___     51 HKLSFKKVFARLVKKLVTLALISVCHFFDQLLNTQGSIRDLAIMFYILYE    100
                     .:|:.|:...|||:|:||:.|||:.||||.:|.|.|.|:||||:|||:||
BPUM_2701___y     51 GQLTMKRFSTRLVRKIVTVFLISMAHFFDVMLKTNGMIKDLAIIFYIIYE    100

BSNT_04460___    101 SVQIVVTASSLGIPVPQMLVDLLETLKNKFKRKP    134
                     |.|||.||::||||:||:.:|:|:.||||.::||
BPUM_2701___y    101 SYQIVSTANALGIPIPQLFIDVLDMLKNKLRKKP    134


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