Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04457 and BPUM_2696

See DNA alignment / Visit BSNT_04457 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:01
# Commandline: needle
#    -asequence pep-align/BSNT_04457___ytlD.1.24716.seq
#    -bsequence pep-align/BPUM_2696___ytlD.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04457___ytlD-BPUM_2696___ytlD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04457___ytlD-BPUM_2696___ytlD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04457___ytlD
# 2: BPUM_2696___ytlD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 270
# Identity:     192/270 (71.1%)
# Similarity:   223/270 (82.6%)
# Gaps:           6/270 ( 2.2%)
# Score: 956.5
# 
#
#=======================================

BSNT_04457___      1 MRNSKETIDLLHEQYQFKQKKEKWKVHSFQLAIFILFFSGWEISSRQGWI     50
                     |::|    |||||.|:.|.:.||.....:||.||..|||.||::|...:|
BPUM_2696___y      1 MKHS----DLLHEAYRKKYRMEKRITRIYQLIIFASFFSLWELASHFRFI     46

BSNT_04457___     51 DPLIFSSPSAVWRLLLEKLGDGSLLSHIGVTLFETVLGFLLGTFMGTCLA    100
                     ||||||:||||.:|.::|:.||||::|:.:||||||||||||||.|..||
BPUM_2696___y     47 DPLIFSAPSAVCQLFVQKIQDGSLMNHMSITLFETVLGFLLGTFCGILLA     96

BSNT_04457___    101 ALLWWSNRLARILDPYLVILNAMPKVALGPILIVALGPSFISIIAMGAII    150
                     |.||||.|||.:||||||||||||||||.|||||||||..|||:||||||
BPUM_2696___y     97 AALWWSTRLANVLDPYLVILNAMPKVALAPILIVALGPGMISIVAMGAII    146

BSNT_04457___    151 SVIITTIVVYTAFQEVDENYTKVMKTFGAKKWVIFKEVILPASSPAIIST    200
                     ||||||||:|||||||||||.||||||||:|.|:|:|||||||.|.:||.
BPUM_2696___y    147 SVIITTIVIYTAFQEVDENYLKVMKTFGARKSVVFREVILPASIPTMISA    196

BSNT_04457___    201 LKVNVGLSWVGVIVGEFLVSKVGLGYMIIYGFQVFNFTLVFLSLLIIAIF    250
                     :|||||||||||||||||||..||||||||||||||||||||||.|||:|
BPUM_2696___y    197 IKVNVGLSWVGVIVGEFLVSSKGLGYMIIYGFQVFNFTLVFLSLFIIAVF    246

BSNT_04457___    251 ATLMYQGVELLEKKWTKGRT    270
                     ||:|||.||.||:::.:.  
BPUM_2696___y    247 ATIMYQLVEWLERRFLQK--    264


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