Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04454 and BPUM_2695

See DNA alignment / Visit BSNT_04454 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:01
# Commandline: needle
#    -asequence pep-align/BSNT_04454___ytlC.1.24716.seq
#    -bsequence pep-align/BPUM_2695___ytlC.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04454___ytlC-BPUM_2695___ytlC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04454___ytlC-BPUM_2695___ytlC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04454___ytlC
# 2: BPUM_2695___ytlC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 260
# Identity:     189/260 (72.7%)
# Similarity:   223/260 (85.8%)
# Gaps:           4/260 ( 1.5%)
# Score: 992.0
# 
#
#=======================================

BSNT_04454___      1 MSFLHVDHVTHTYFSIKEKTTAVRDIHFDAEKGDFISFLGPSGCGKTTLL     50
                     ||||.:|||||||||:||||||::.|:.:.::|:||||:|||||||||||
BPUM_2695___y      1 MSFLQIDHVTHTYFSLKEKTTAIQHINLEIDQGEFISFIGPSGCGKTTLL     50

BSNT_04454___     51 SIIAGLIEPSEGRVLIEGREPNQKEHNIGYMLQQDYLFPWKSIEENVLLG    100
                     |||||:..|||||:||||:||||:||.||||||||||||||:|:|||:||
BPUM_2695___y     51 SIIAGITPPSEGRILIEGKEPNQQEHQIGYMLQQDYLFPWKTIKENVILG    100

BSNT_04454___    101 LKIADTLTEESKAAALGLLPEFGLIDVEKKYPKELSGGMRQRAALARTLA    150
                     ||||...:.||.:|||.|||:.||..||:|||||||||||||||||||||
BPUM_2695___y    101 LKIAKQDSHESVSAALDLLPKLGLHAVEEKYPKELSGGMRQRAALARTLA    150

BSNT_04454___    151 PNPSLLLLDEPFSALDFQTKLSLENLVFRTLKEYQKTAVLVTHDIGEAIA    200
                     .:|.||||||||||||:||||:||:|||.|||.|||||||||||||||||
BPUM_2695___y    151 VDPGLLLLDEPFSALDYQTKLTLEDLVFDTLKNYQKTAVLVTHDIGEAIA    200

BSNT_04454___    201 MSDTIFLFSNQPGTIHQIFTIPKELAAMLPFDARQEPSFQTLFQTIWKEL    250
                     |||.|||||..||:|.:||.:|.::.|:.||:|||.|.||.|||||||||
BPUM_2695___y    201 MSDRIFLFSKHPGSIQRIFPVPDDIRALSPFEARQTPHFQELFQTIWKEL    250

BSNT_04454___    251 NSLEKQQRNH    260
                     .::|.|    
BPUM_2695___y    251 KTVETQ----    256


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