Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04454 and BPUM_2695
See
Amino acid alignment /
Visit
BSNT_04454 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:01
# Commandline: needle
# -asequence dna-align/BSNT_04454___ytlC.1.24716.seq
# -bsequence dna-align/BPUM_2695___ytlC.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04454___ytlC-BPUM_2695___ytlC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04454___ytlC-BPUM_2695___ytlC.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04454___ytlC
# 2: BPUM_2695___ytlC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 819
# Identity: 565/819 (69.0%)
# Similarity: 565/819 (69.0%)
# Gaps: 84/819 (10.3%)
# Score: 1894.0
#
#
#=======================================
BSNT_04454___ 1 ATGTCTTTCTTACATGTCGACCATGTAACCCATACTTATTTTTCTATTAA 50
|||||||||.|.||..|.||||||||.||||||||.||.||.|||.|.||
BPUM_2695___y 1 ATGTCTTTCCTTCAAATTGACCATGTGACCCATACGTACTTCTCTTTAAA 50
BSNT_04454___ 51 AGAAAAAACAACGGCTGTGCGGGATATTCATTTCGATGCCGAAA----AA 96
||||||||||||||||.|.|.|.|.||..||||.|| ||.| ||
BPUM_2695___y 51 AGAAAAAACAACGGCTATACAGCACATCAATTTGGA----GATAGACCAA 96
BSNT_04454___ 97 GGCGATTTCATCTCATTTCTCGGCCCAAGCGGCTGCGGAAAAACAACATT 146
||.||.||||||||||||.|.||.||.|||||||||||||||||.||.||
BPUM_2695___y 97 GGTGAATTCATCTCATTTATTGGTCCCAGCGGCTGCGGAAAAACCACCTT 146
BSNT_04454___ 147 GCTTTCCATTATTGCCGGTTTGATTGA----GCCATCAGAAGGCAGAGTT 192
|||.||.||.||.||.| ||.|.| |||.||.|||||..||.||
BPUM_2695___y 147 GCTGTCTATCATCGCAG----GAATCACACCGCCCTCTGAAGGTCGAATT 192
BSNT_04454___ 193 CTGATTGAAGGCCGTGAGCCGAATCAAAAAGAACATAATATTGGCTATAT 242
.|.||.|||||....||.||.||||||.|.||.|||.|.||.||||||||
BPUM_2695___y 193 TTAATCGAAGGAAAAGAACCCAATCAACAGGAGCATCAAATCGGCTATAT 242
BSNT_04454___ 243 GCTTCAGCAGGATTACTTATTTCCCTGGAAATCTATCGAGGAAAATGTGC 292
|||.|||||.|||||.||.|||||.|||||..|.||..|||||||||||.
BPUM_2695___y 243 GCTCCAGCAAGATTATTTGTTTCCTTGGAAGACCATTAAGGAAAATGTGA 292
BSNT_04454___ 293 TTCTCGGTTTAAAAATCGCCGACACGCTGACAGAAGA-----AAGCAAAG 337
|.|||||.||||||||.|| ||.|.|||| |.| ||
BPUM_2695___y 293 TCCTCGGGTTAAAAATTGC---------GAAACAAGATTCACATG---AG 330
BSNT_04454___ 338 -------CCGCTGCACTCGGTCTATTGCCGGAGTTCGGCCT-CATAGATG 379
|.|||||.||.|.|.||.|.||..||.|.||.|| ||| |..|
BPUM_2695___y 331 TCCGTCTCAGCTGCCCTTGATTTACTACCTAAGCTTGGACTACAT-GCAG 379
BSNT_04454___ 380 TGGAGAAAAAATATCCGAAAGAACTGTCAGGCGGGATGCGCCAGCGGGCT 429
|.|||.|||||||||||||.||.|||||.|||||.|||.|.|||||.||.
BPUM_2695___y 380 TAGAGGAAAAATATCCGAAGGAGCTGTCTGGCGGAATGAGGCAGCGTGCG 429
BSNT_04454___ 430 GCGCTTGCAAGAACACTTGCGCCTAACCCTAGTCTGCTTTTGCTGGATGA 479
||.||.||..||||.|||||...|.|.||..||||||||||.||.|||||
BPUM_2695___y 430 GCTCTCGCCCGAACGCTTGCAGTTGATCCCGGTCTGCTTTTACTTGATGA 479
BSNT_04454___ 480 GCCATTTTCCGCGCTTGATTTTCAGACAAAGCTGTCTTTGGAAAACCTGG 529
|||||||||.|||||.||.|.|||.||.||.||..|.||.|||.|.||.|
BPUM_2695___y 480 GCCATTTTCAGCGCTAGACTATCAAACCAAACTCACATTAGAAGATCTCG 529
BSNT_04454___ 530 TATTCCGCACATTAAAGGAATATCAAAAAACAGCAGTGCTTGTCACTCAT 579
|.||...|||||||||..|.|||||||||||||||||.|||||.||.|||
BPUM_2695___y 530 TCTTTGACACATTAAAAAACTATCAAAAAACAGCAGTCCTTGTGACACAT 579
BSNT_04454___ 580 GATATAGGGGAAGCGATAGCGATGAGCGATACG-ATCTTTTTATTTTCAA 628
||.||.||.|||||.||.||||||||.|| .|| ||.||.|||||.||||
BPUM_2695___y 580 GACATTGGCGAAGCCATTGCGATGAGTGA-CCGCATTTTCTTATTCTCAA 628
BSNT_04454___ 629 ATCAGCCGGGCACCATCCATCAGATTTTTACCATTCC--------TAAGG 670
|.||.||.|||.|.|||||.|..||.|||.||.|||| |||||
BPUM_2695___y 629 AACACCCAGGCTCTATCCAGCGAATCTTTCCCGTTCCAGACGACATAAGG 678
BSNT_04454___ 671 AATTGGCCGCGATGTTGCCTTTTGACGCCCGTCAGGAACCTTCC----TT 716
||..|.|..||||||||.||..|.||| ||| || ||
BPUM_2695___y 679 --------GCTCTCTCTCCTTTTGAAGCGAGACAG--ACC--CCGCATTT 716
BSNT_04454___ 717 CC-AGACACTGTTTCAAACGATATGGAAGGAGCTGAATTCTCTTGAGAAA 765
|| ||| .||.|||||||||||.||||||||||||| |||
BPUM_2695___y 717 CCAAGA-GCTCTTTCAAACGATTTGGAAGGAGCTGA-----------AAA 754
BSNT_04454___ 766 CAGCAAAGAAAC-CATTGA 783
||| ..||||| ||.|||
BPUM_2695___y 755 CAG--TTGAAACACAGTGA 771
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.