Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04440 and BPUM_2680

See DNA alignment / Visit BSNT_04440 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:59
# Commandline: needle
#    -asequence pep-align/BSNT_04440___ytqA.1.24716.seq
#    -bsequence pep-align/BPUM_2680.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04440___ytqA-BPUM_2680.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04440___ytqA-BPUM_2680.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04440___ytqA
# 2: BPUM_2680
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 322
# Identity:     280/322 (87.0%)
# Similarity:   303/322 (94.1%)
# Gaps:           1/322 ( 0.3%)
# Score: 1534.0
# 
#
#=======================================

BSNT_04440___      1 MMQNNPFPYSNTEKRYHTLNYHLREHFGHKVFKVALDGGFDCPNRDGTVA     50
                     |.|:|||.|||:||||||.|||||||||||||||||||||||||||||||
BPUM_2680          1 MDQHNPFLYSNSEKRYHTWNYHLREHFGHKVFKVALDGGFDCPNRDGTVA     50

BSNT_04440___     51 HGGCTFCSAAGSGDFAGNRTDDLITQFHDIKNRMHEKWKDGKYIAYFQAF    100
                     |||||||||||||||||||.|||:|||::||:|||.|||||||:|||||:
BPUM_2680         51 HGGCTFCSAAGSGDFAGNRADDLVTQFNEIKDRMHTKWKDGKYMAYFQAY    100

BSNT_04440___    101 TNTHAPVEVLREKFESVLALDDVVGISIATRPDCLPDDVVDYLAELNERT    150
                     ||||||:.||:||||:|:.||.|||:||||||||||||||:|||||||||
BPUM_2680        101 TNTHAPLPVLKEKFETVMNLDGVVGLSIATRPDCLPDDVVEYLAELNERT    150

BSNT_04440___    151 YLWVELGLQTVHERTALLINRAHDFNCYVEGVNKLRKHGIRVCSHIINGL    200
                     ||||||||||||||||:|||||||:.||||||.|||||||||||||||||
BPUM_2680        151 YLWVELGLQTVHERTAMLINRAHDYECYVEGVEKLRKHGIRVCSHIINGL    200

BSNT_04440___    201 PLEDRDMMMETAKAVADLDVQGIKIHLLHLLKGTPMVKQYEKGKLEFLSQ    250
                     |||:||||||||||||||||||||||||||||||||||||||||||||||
BPUM_2680        201 PLENRDMMMETAKAVADLDVQGIKIHLLHLLKGTPMVKQYEKGKLEFLSQ    250

BSNT_04440___    251 DDYVQLVCDQLEIIPPEMIVHRITGDGPIELMIGPMWSVNKWEVLGAINK    300
                     ::|||||||||||:|||||:||||||||||||:||||||||||||.|||.
BPUM_2680        251 EEYVQLVCDQLEILPPEMIIHRITGDGPIELMVGPMWSVNKWEVLNAINA    300

BSNT_04440___    301 ELENRGSYQGKFFQRLEEESAL    322
                     |||.|.|||||.|.||||.:. 
BPUM_2680        301 ELERRNSYQGKRFVRLEEAAK-    321


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