Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04431 and BPUM_2673
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:59
# Commandline: needle
# -asequence pep-align/BSNT_04431___ytrF.1.24716.seq
# -bsequence pep-align/BPUM_2673___ytrF.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04431___ytrF-BPUM_2673___ytrF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04431___ytrF-BPUM_2673___ytrF.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04431___ytrF
# 2: BPUM_2673___ytrF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 440
# Identity: 269/440 (61.1%)
# Similarity: 339/440 (77.0%)
# Gaps: 8/440 ( 1.8%)
# Score: 1324.0
#
#
#=======================================
BSNT_04431___ 1 MRFKDQVHFIRRNMKKNRLRVFMTILATTMAYAFLVVLSSVGFGIQKTIT 50
|:|:|||.|||||||||||||||||||||||.:||:||:|||||:||:..
BPUM_2673___y 1 MKFRDQVKFIRRNMKKNRLRVFMTILATTMACSFLIVLASVGFGLQKSAQ 50
BSNT_04431___ 51 DMTMSQQIVTKVSVMGKE-GDKPIKKADLEKYDHVRSVVERTQMYEPNKA 99
|..|.|||:|:|.|:||| || :|..||:|||||:|||.||.:......
BPUM_2673___y 51 DEIMKQQIITEVKVLGKEKGD--VKVDDLKKYDHVKSVVSRTAINPSVNV 98
BSNT_04431___ 100 TLGNRTNESSNLIFTNMNDELKANMELEKGRVAKSENEIVVGYDFAKRLL 149
.||:|::|:...: |:|.:|.:|.:||::|:|..|.|||||||..|::|.
BPUM_2673___y 99 ELGDRSSETQAAL-TDMKEEKEAGLELDRGKVPTSANEIVVGYHMAEQLW 147
BSNT_04431___ 150 TKKESEEYNKKIEEAKGNPEDIKEPKGYTKDILNKTIELSVSKTDPKTGD 199
||||.:.|.||:.:.....|..:||||||||||||.|::.|.|.: :..:
BPUM_2673___y 148 TKKERQAYEKKLNQTSNGEEMPEEPKGYTKDILNKVIQVKVPKLN-EENE 196
BSNT_04431___ 200 VTKTKTYDFKIVGITKKPSQDWMEDSNIFISDQFKKDFSEFLDF--KGGN 247
|.|.||:||::||:.|||:.:|.||..|.|.:.::|:|.:.||. :.||
BPUM_2673___y 197 VVKEKTFDFRVVGVLKKPNLEWQEDHKILIPNAYEKEFGQVLDLSPEAGN 246
BSNT_04431___ 248 VETNIGVFADKFENVEQLTNDLTDDGYYVTSVTTELEGANTFFMVFKIGL 297
||....|:||||:||..|||.|||:||.|.|||.:|||.:.||.||||||
BPUM_2673___y 247 VEKMTSVYADKFDNVGALTNKLTDEGYQVISVTNQLEGMDMFFTVFKIGL 296
BSNT_04431___ 298 IFVGCIAVIISAIGIFNTMTMAVTERTQEIGIMKAIGASPSIIRRMFLME 347
||||||||||||||||||||||||||||||||||||||:||||:||||||
BPUM_2673___y 297 IFVGCIAVIISAIGIFNTMTMAVTERTQEIGIMKAIGANPSIIKRMFLME 346
BSNT_04431___ 348 SAYIGILGCVIGIIISYGVSYLVNLAVPMILAATS-GSDAGDLNYTFSYI 396
|||||::|.:|||||||.:|:.|||.:|.||::.| |..:...:.|||||
BPUM_2673___y 347 SAYIGVIGSIIGIIISYIISFAVNLIIPAILSSMSEGGSSEQFSITFSYI 396
BSNT_04431___ 397 PASLVIIAVVICGGVAVISGMNPARKATKTNVLTALRREL 436
|.||||.|.||..|||::||:||||||||||||.|||||:
BPUM_2673___y 397 PLSLVITATVISAGVAILSGLNPARKATKTNVLAALRREI 436
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