Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04424 and BPUM_2672

See DNA alignment / Visit BSNT_04424 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:58
# Commandline: needle
#    -asequence pep-align/BSNT_04424___yttA.1.24716.seq
#    -bsequence pep-align/BPUM_2672___yttA.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04424___yttA-BPUM_2672___yttA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04424___yttA-BPUM_2672___yttA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04424___yttA
# 2: BPUM_2672___yttA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 255
# Identity:      96/255 (37.6%)
# Similarity:   129/255 (50.6%)
# Gaps:          30/255 (11.8%)
# Score: 372.0
# 
#
#=======================================

BSNT_04424___      1 MEMVLAFLGFLACLIALGYGLYHLVRYVLKKEKR---FSKRLFWPLFIGG     47
                       |:|..:|.|....|:||.    |.:.|.|.:.   |||:||:|..|.|
BPUM_2672___y      1 --MMLLIIGLLCVCFAIGYA----VNFFLLKHQNAQIFSKKLFYPFLILG     44

BSNT_04424___     48 LVLLFTGAALAEPDTAAANAEKKYSALNAEYKNLTKEHEEL--EKEYKSV     95
                     |:........|..|...|.|:.....|..:.|.||.:...|  :||..:.
BPUM_2672___y     45 LIFSIMSLPFAATDAPKAQADPSSEQLLKDQKQLTSDITRLKADKEELTA     94

BSNT_04424___     96 SSEAKKLKDNKEDQDKLEKLKNENSDLKKTQKSLKAEIKELQENQKQLKE    145
                     |.| ...||.::...|||.:..|...:||.:|:::|           |:|
BPUM_2672___y     95 SLE-DATKDKEKLTKKLETITAEKETVKKQEKTIQA-----------LEE    132

BSNT_04424___    146 DAKTAKAENETLRQDKTKLENQLKETESQTA--SSHEDTGSSSNNTSKSD    193
                     ......:.||||:::..|..|   :|||.|.  |:.:|.|.|:.......
BPUM_2672___y    133 KIDKLTSSNETLKKENKKSGN---DTESSTTQRSAPKDEGKSTGGHESQK    179

BSNT_04424___    194 ETKTADKAEGCNIKGSKNGIYHTPGSTYYDRTTDPAEMFCSVEEAEAAGY    243
                     |||....|  ||||||.|||||||.|.||.||.:..:|||||||||.|||
BPUM_2672___y    180 ETKKESAA--CNIKGSVNGIYHTPSSRYYSRTKNVTKMFCSVEEAERAGY    227

BSNT_04424___    244 RAPKR    248
                     ||||:
BPUM_2672___y    228 RAPKQ    232


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