Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04418 and BPUM_2670

See DNA alignment / Visit BSNT_04418 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:58
# Commandline: needle
#    -asequence pep-align/BSNT_04418___ytvB.1.24716.seq
#    -bsequence pep-align/BPUM_2670___ytvB.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04418___ytvB-BPUM_2670___ytvB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04418___ytvB-BPUM_2670___ytvB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04418___ytvB
# 2: BPUM_2670___ytvB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 140
# Identity:      68/140 (48.6%)
# Similarity:    82/140 (58.6%)
# Gaps:          47/140 (33.6%)
# Score: 349.5
# 
#
#=======================================

BSNT_04418___      1 ---------------------------------------------MGILG      5
                                                                  |||||
BPUM_2670___y      1 MDYDGTAEWHYRGLDSLKSLYYSKGFRKVMKMLQQVIIACAIGGVMGILG     50

BSNT_04418___      6 HVKKRGRLEKPRMTKRFIYLGFLEDWFIGMTASILLVLSADPDSGIQLVI     55
                     ||||:||||||||||:||||||:|||.:||.|:.|||||::|:|.:.|||
BPUM_2670___y     51 HVKKKGRLEKPRMTKKFIYLGFIEDWLVGMIAATLLVLSSNPESSLHLVI    100

BSNT_04418___     56 LSIISGYGGEAVLRSFDFVRELNSGGEPAESKRQTKTPPE     95
                     |||||||||||||||||||||.:|  :.|:|.|..::|.|
BPUM_2670___y    101 LSIISGYGGEAVLRSFDFVREQHS--QNADSNRHNRSPHE    138


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