Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04418 and BPUM_2670
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:58
# Commandline: needle
# -asequence dna-align/BSNT_04418___ytvB.1.24716.seq
# -bsequence dna-align/BPUM_2670___ytvB.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04418___ytvB-BPUM_2670___ytvB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04418___ytvB-BPUM_2670___ytvB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04418___ytvB
# 2: BPUM_2670___ytvB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 433
# Identity: 216/433 (49.9%)
# Similarity: 216/433 (49.9%)
# Gaps: 161/433 (37.2%)
# Score: 748.0
#
#
#=======================================
BSNT_04418___ 0 -------------------------------------------------- 0
BPUM_2670___y 1 ATGGATTATGACGGAACAGCAGAATGGCATTACAGGGGGCTGGACAGCCT 50
BSNT_04418___ 0 -------------------------------------------------- 0
BPUM_2670___y 51 GAAGTCGCTTTACTATTCTAAGGGCTTTAGGAAGGTGATGAAAATGCTGC 100
BSNT_04418___ 1 -----------------------------------ATGGGGATTCTCGGT 15
|||||.|||||||||
BPUM_2670___y 101 AACAAGTCATTATTGCTTGCGCCATTGGAGGGGTCATGGGCATTCTCGGT 150
BSNT_04418___ 16 CATGTGAAAAAGAGAGGCAGGCTGGAGAAGCCCAGAATGACGAAGCGGTT 65
||.||.||.||.|.|||||||||.|||||||||||||||||.||...|||
BPUM_2670___y 151 CACGTAAAGAAAAAAGGCAGGCTAGAGAAGCCCAGAATGACAAAAAAGTT 200
BSNT_04418___ 66 TATCTACCTTGGATTTTTGGAAGATTGGTTTATCGGCATGA---CGGCTT 112
|||.||..|.||.|||.|.|||||||||.|..|.||.|||| |.|||.
BPUM_2670___y 201 TATTTATTTAGGGTTTATTGAAGATTGGCTCGTTGGGATGATTGCCGCTA 250
BSNT_04418___ 113 C-CATTTTACTTGTATTATCCGCTGACCCCGATTCAGGAATTCAACTT-G 160
| | |.|||||.||||||.|..|.|||||.||..|..|.| |||| |
BPUM_2670___y 251 CAC----TGCTTGTCTTATCCTCAAATCCCGAATCTAGTCTGC-ACTTGG 295
BSNT_04418___ 161 TCATCTTATCCATTATCTCAGGCTACGGCGGTGAAGCTGTTCTCAGAAGT 210
||||||||||.|||||.|||||.|||||.||.|||||.|||||..||||.
BPUM_2670___y 296 TCATCTTATCAATTATTTCAGGTTACGGAGGAGAAGCAGTTCTGCGAAGC 345
BSNT_04418___ 211 TTTGACTTTGTGAGAGAAC----TGAACAGCGGCGGCGAACCGGCCGAGT 256
||||||||||||||||||| |..||| ||| .||.||.|
BPUM_2670___y 346 TTTGACTTTGTGAGAGAACAGCATTCACA--------GAA--TGCAGACT 385
BSNT_04418___ 257 CCAAACGTCA-AACCAAAACTCCACCCGAATAA 288
||||.||||| |||| ...||||||.|||||||
BPUM_2670___y 386 CCAACCGTCATAACC-GCTCTCCACACGAATAA 417
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