Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04417 and BPUM_2669

See DNA alignment / Visit BSNT_04417 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:58
# Commandline: needle
#    -asequence pep-align/BSNT_04417___leuS.1.24716.seq
#    -bsequence pep-align/BPUM_2669___leuS.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04417___leuS-BPUM_2669___leuS.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04417___leuS-BPUM_2669___leuS.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04417___leuS
# 2: BPUM_2669___leuS
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 849
# Identity:     704/849 (82.9%)
# Similarity:   758/849 (89.3%)
# Gaps:          45/849 ( 5.3%)
# Score: 3867.0
# 
#
#=======================================

BSNT_04417___      1 ---------------------------------------------MSFQH      5
                                                                  :||||
BPUM_2669___l      1 MVPREPKNLSSLSRDEGFLLILEKSEFLQWSSEQIQPYILKEVFTLSFQH     50

BSNT_04417___      6 KEIEKKWQTYWLENKTFATLDNNEKQKFYALDMFPYPSGAGLHVGHPEGY     55
                     :|||||||.|||.:|||||.|:.:|.||||||||||||||||||||||||
BPUM_2669___l     51 REIEKKWQDYWLTHKTFATSDSEDKPKFYALDMFPYPSGAGLHVGHPEGY    100

BSNT_04417___     56 TATDILSRMKRMQGYDVLHPMGWDAFGLPAEQYALDTGNDPAVFTKQNID    105
                     |||||||||||||||||||||||||||||||||||||||||||||::||:
BPUM_2669___l    101 TATDILSRMKRMQGYDVLHPMGWDAFGLPAEQYALDTGNDPAVFTEENIN    150

BSNT_04417___    106 NFRRQIQALGFSYDWDREINTTDPEYYKWTQWIFLKLYEKGLAYVDEVPV    155
                     |||||||:||||||||||||||||.|||||||||||||||||||:|||||
BPUM_2669___l    151 NFRRQIQSLGFSYDWDREINTTDPNYYKWTQWIFLKLYEKGLAYIDEVPV    200

BSNT_04417___    156 NWCPALGTVLANEEVIDGKSERGGHPVERRPMKQWMLKITAYADRLLEDL    205
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BPUM_2669___l    201 NWCPALGTVLANEEVIDGKSERGGHPVERRPMKQWMLKITAYADRLLEDL    250

BSNT_04417___    206 EELDWPESIKDMQRNWIGRSEGAHVHFAIDGHDDSFTVFTTRPDTLFGAT    255
                     |::||||||||||||||||||||||||.|:|||:.|||||||||||||||
BPUM_2669___l    251 EDIDWPESIKDMQRNWIGRSEGAHVHFEIEGHDEQFTVFTTRPDTLFGAT    300

BSNT_04417___    256 YTVLAPEHALVENITTAEQKEAVEAYIKEIQSKSDLERTDLAKTKTGVFT    305
                     |.||||||||||.||||.|||||||||||||||||||||||||||||:||
BPUM_2669___l    301 YAVLAPEHALVEKITTATQKEAVEAYIKEIQSKSDLERTDLAKTKTGIFT    350

BSNT_04417___    306 GAYAINPVNGEKLPIWIADYVLASYGTGAVMAVPGHDERDFEFAKTFGLP    355
                     ||||:||:||||:||||||||||:|||||:||||.|||||:||||||.||
BPUM_2669___l    351 GAYAVNPLNGEKMPIWIADYVLATYGTGAIMAVPAHDERDYEFAKTFDLP    400

BSNT_04417___    356 VKEVVKGGNVEEAAYTGDGEHVNSDFLNGLHKQEAIEKVIAWLEETKNGE    405
                     :|.||:||::||.||||||:|:|||||:||.|:||||||||||||.:.||
BPUM_2669___l    401 IKAVVEGGDIEEEAYTGDGKHINSDFLDGLGKEEAIEKVIAWLEEHQKGE    450

BSNT_04417___    406 KKVTYRLRDWLFSRQRYWGEPIPVIHWEDGTSTAVPEEELPLILPKTDEI    455
                     |||||||||||||||||||||||:||||||||:||.||:||||||||.||
BPUM_2669___l    451 KKVTYRLRDWLFSRQRYWGEPIPIIHWEDGTSSAVSEEDLPLILPKTTEI    500

BSNT_04417___    456 KPSGTGESPLANIKEWVEVTDPETGKKGRRETNTMPQWAGSCWYFLRYID    505
                     ||||||||||||||:||||.||.|||||||||||||||||||||||||||
BPUM_2669___l    501 KPSGTGESPLANIKDWVEVVDPVTGKKGRRETNTMPQWAGSCWYFLRYID    550

BSNT_04417___    506 PHNPDQLASPEKLEKWLPVDMYIGGAEHAVLHLLYARFWHKFLYDIGVVP    555
                     |||.::|||||||:||||||:|||||||||||||||||||||||||||||
BPUM_2669___l    551 PHNSEELASPEKLKKWLPVDVYIGGAEHAVLHLLYARFWHKFLYDIGVVP    600

BSNT_04417___    556 TKEPFQKLYNQGMILGENNEKMSKSKGNVVNPDEIVASHGADTLRLYEMF    605
                     |||||.||:||||||||||||||||||||||||:||.|||||||||||||
BPUM_2669___l    601 TKEPFMKLFNQGMILGENNEKMSKSKGNVVNPDDIVESHGADTLRLYEMF    650

BSNT_04417___    606 MGPLDASIAWSESGLDGARRFLDRVWRLFIEDSGELNGKIVEGAGETLER    655
                     ||||||||||||:||||||||||||||||..:.|.::.|:.|..|..|||
BPUM_2669___l    651 MGPLDASIAWSETGLDGARRFLDRVWRLFTNEDGTISDKVTEQTGGALER    700

BSNT_04417___    656 VYHETVMKVTDHYEGLRFNTGISQLMVFINEAYKATELPKEYMEGFVKLL    705
                     .|||||||||||||||||||||||||||||:||||..|||||.|||||||
BPUM_2669___l    701 SYHETVMKVTDHYEGLRFNTGISQLMVFINDAYKADTLPKEYAEGFVKLL    750

BSNT_04417___    706 SPVAPHLAEELWEKLGHSGTIAYEAWPVYDETKLVDDEVEIVVQLNGKVK    755
                     ||:|||||||||.||||.|:|:|||||.|||:||||||||||||||||||
BPUM_2669___l    751 SPIAPHLAEELWNKLGHEGSISYEAWPQYDESKLVDDEVEIVVQLNGKVK    800

BSNT_04417___    756 AKLQVPADATKEQLEQLAQADEKVKEQLEGKTIRKIIAVPGTLVNIVAN    804
                     |||.|||||||||||.||::|.:||||||||||||:|||||.|||||||
BPUM_2669___l    801 AKLTVPADATKEQLEDLAKSDARVKEQLEGKTIRKVIAVPGKLVNIVAN    849


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

Amino acid alignment: BSNT_04417 and BPUM_2669

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
