Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04240 and BPUM_2663
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:45
# Commandline: needle
# -asequence pep-align/BSNT_04240___ytbD.1.24716.seq
# -bsequence pep-align/BPUM_2663.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04240___ytbD-BPUM_2663.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04240___ytbD-BPUM_2663.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04240___ytbD
# 2: BPUM_2663
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 403
# Identity: 257/403 (63.8%)
# Similarity: 318/403 (78.9%)
# Gaps: 9/403 ( 2.2%)
# Score: 1306.0
#
#
#=======================================
BSNT_04240___ 1 MTSANKSNIPALLALAVSAFAIGTTEFISVGLLPLIADDLDIPVTTAGLT 50
...|.|..||||||:|||||||||||||||||:|::|..:.|:.||.|
BPUM_2663 1 --MKKKQNHLALLALAISAFAIGTTEFISVGLLPMISEDFGVSVSQAGWT 48
BSNT_04240___ 51 VSLYALGVTFGAPILTSLTSSMSRKTLLLWIMFIFIAGNTMAATASSIGI 100
||||||||||||||||||||:|.||||||.||.:|:.|||:|..|.:..|
BPUM_2663 49 VSLYALGVTFGAPILTSLTSTMKRKTLLLLIMLVFLIGNTLATIAPTFSI 98
BSNT_04240___ 101 LLAARVISAFSHGVFMSIGSTIAADIVPEDKRASAISIMFTGLTVATVTG 150
||..|||||.|||:||||||||||.:|.::||||||:.||||||||||||
BPUM_2663 99 LLIGRVISALSHGIFMSIGSTIAASLVVKEKRASAIAFMFTGLTVATVTG 148
BSNT_04240___ 151 VPFGTFIGQQFGWRFAFMVIIAVGIIAFITNGILVPSKLRKGTKTTMRDQ 200
||||||:|.:.|||.:|.||:.:|:||.|:|..||||:|::|.||:.:||
BPUM_2663 149 VPFGTFLGHELGWRTSFGVIVIIGLIALISNYFLVPSQLKQGVKTSFKDQ 198
BSNT_04240___ 201 LKLVTNSRLLLLFVITALGYGGTFVVFTYLSPLLQEVTGFKAGTVAVILL 250
..|:...|:||||||||.|||||||||||||||||.|||...|.||:|||
BPUM_2663 199 AVLLKTKRILLLFVITATGYGGTFVVFTYLSPLLQHVTGLAPGAVALILL 248
BSNT_04240___ 251 GYGIAIAIGNMIGGKLSNRNPIAALFYMFIVQAIVLFVLTFTAPYQAAGL 300
.|||.||.||:||||::|..|:.||.||||:|:|:||:|:.||.:...|:
BPUM_2663 249 LYGITIAAGNVIGGKVANEKPMKALIYMFIIQSIILFILSLTAGFTVLGI 298
BSNT_04240___ 301 ITILCMGLLAFMNVPGLQVYVVMLAERFVPSAVDVASAMNIAAFNAGIAL 350
.|::.|||.||||||||||.||..|||:.|.||||||||||||||||||:
BPUM_2663 299 ATVMLMGLFAFMNVPGLQVAVVDFAERYTPGAVDVASAMNIAAFNAGIAI 348
BSNT_04240___ 351 GSYLGGVITDSIGLIHTAWIGGLMVVGAVILTGWSRLMEKRDRQEA---- 396
||:|||::||::||:||.|:||:||:.|.|||..|..:|:::::..
BPUM_2663 349 GSFLGGIVTDTLGLVHTGWVGGIMVLIAAILTMISFRIEQQEQKSNHLKE 398
BSNT_04240___ 396 --- 396
BPUM_2663 399 RSI 401
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