Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04239 and BPUM_2662

See DNA alignment / Visit BSNT_04239 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:45
# Commandline: needle
#    -asequence pep-align/BSNT_04239___ytcD.1.24716.seq
#    -bsequence pep-align/BPUM_2662___ytcD.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04239___ytcD-BPUM_2662___ytcD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04239___ytcD-BPUM_2662___ytcD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04239___ytcD
# 2: BPUM_2662___ytcD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 137
# Identity:     105/137 (76.6%)
# Similarity:   113/137 (82.5%)
# Gaps:          14/137 (10.2%)
# Score: 551.0
# 
#
#=======================================

BSNT_04239___      1 -----------MEKKKYNISVEATLEVIGGKWKCVILCHLTHGKKRTSEL     39
                                |||||||||||||||||||||||||||||||||||||||
BPUM_2662___y      1 MPVRIKRSEDLMEKKKYNISVEATLEVIGGKWKCVILCHLTHGKKRTSEL     50

BSNT_04239___     40 KRLMPNITQKMLTQQLRELEADSVINRIVYNQVPPKVEYELSEYGRSLEG     89
                     ||||||||||||||||||||:|.|||||||.||||||||||||||:|||.
BPUM_2662___y     51 KRLMPNITQKMLTQQLRELESDGVINRIVYEQVPPKVEYELSEYGQSLER    100

BSNT_04239___     90 ILDMLCAWGANHINRVYGDTFSVLEESVLNDKLKQES    126
                     ||:.||.|||.||.||||:..||||:|:||::.|   
BPUM_2662___y    101 ILNALCDWGAAHIERVYGEPLSVLEDSILNEQFK---    134


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