Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04392 and BPUM_2661
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:56
# Commandline: needle
# -asequence pep-align/BSNT_04392.1.24716.seq
# -bsequence pep-align/BPUM_2661___ytdP.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04392-BPUM_2661___ytdP.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04392-BPUM_2661___ytdP.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04392
# 2: BPUM_2661___ytdP
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 770
# Identity: 273/770 (35.5%)
# Similarity: 331/770 (43.0%)
# Gaps: 373/770 (48.4%)
# Score: 1461.0
#
#
#=======================================
BSNT_04392 0 -------------------------------------------------- 0
BPUM_2661___y 1 MGGFMKRRQYKFYYKLVTFFFMLSTIPVIIVGIFSYQHSQKTALENISNE 50
BSNT_04392 0 -------------------------------------------------- 0
BPUM_2661___y 51 KLDSVKQTQSNIEHILKTVDHSLTHYVSSPPLLQTLAEPLNPDQFQLYNQ 100
BSNT_04392 0 -------------------------------------------------- 0
BPUM_2661___y 101 VQQELNYLQTFDTDLSNITLVSKMEDWYMNNSGLYHVTSGDQEKALTSYL 150
BSNT_04392 0 -------------------------------------------------- 0
BPUM_2661___y 151 NIPSHSSWVLEENNPLVATKEGKASFCKYNVNLIKQLPMNSVQKKGIAVA 200
BSNT_04392 0 -------------------------------------------------- 0
BPUM_2661___y 201 SIPSCTIANNMPDFSQSDSMFVIDTNGKVLLHNRKKQIGESLKNQEFVKH 250
BSNT_04392 0 -------------------------------------------------- 0
BPUM_2661___y 251 VLSSEERSGQFNMKIEELNYQITFQKSDYNEWTYLSFVSIPELKAQTKSI 300
BSNT_04392 0 -------------------------------------------------- 0
BPUM_2661___y 301 GWITFIICFILLALSLLFSWFGSRHFYKPIRLLYESFARNESFLQKQPFQ 350
BSNT_04392 1 -----------------------MKQQATHLQQYFMVRLMLGKLTDEEVD 27
::||.|||||||||||:|||||:||::
BPUM_2661___y 351 NEFELIESSIKQMKDQNNDLEERIEQQVTHLQQYFMVRLLLGKLTEEEIN 400
BSNT_04392 28 NRFESLGLKQNWRHLALLVLQIDTLNHTPYEKKDMDLLLFAVNSLIERSI 77
|||:|||..|.|.||::||.|||||..|||||||.||||||:|.|||:.|
BPUM_2661___y 401 NRFQSLGFPQGWSHLSMLVTQIDTLKGTPYEKKDADLLLFAINGLIEQII 450
BSNT_04392 78 PTDKHLAPAVVDKQQATILINQSGTKEEFMAELNETARMIQEKAEAELQL 127
|.::||.|.||::.|.||::|.|.:.|||...||:.|..||.:.|.||.|
BPUM_2661___y 451 PQEEHLQPTVVNQHQTTIILNHSKSDEEFTEYLNQLAETIQLRIEEELGL 500
BSNT_04392 128 SVSIGVSQPFDALTKAKTAYAEGSEALKYRLKAENKSIIFYEDLDQKKTF 177
|:|||:|:.|..||.||.||.||.||||||||||.||||.||.:.|.|||
BPUM_2661___y 501 SISIGISRQFQELTMAKQAYIEGKEALKYRLKAEKKSIILYEHIQQGKTF 550
BSNT_04392 178 KTHFPKQLQHELFDAVKAGDKEKADKCLHAILQAIFTQNTNPYQFQIAIA 227
||||||||||:||||:||||:.|||..||.:||:||::|..|:::.||:|
BPUM_2661___y 551 KTHFPKQLQHDLFDAIKAGDQGKADHYLHVLLQSIFSKNAGPHEYHIALA 600
BSNT_04392 228 RFLNHVIELMHVLGIELFELEENKMLYDQIFELKTFEDTENWLKNEFIDP 277
||||::|||||:|||||||:|:||||||.|||.|||||||.|||:|.|.|
BPUM_2661___y 601 RFLNNLIELMHLLGIELFEVEDNKMLYDTIFEFKTFEDTEAWLKHEIIQP 650
BSNT_04392 278 MTDKVNARADAQYKNISDNIIHIIHHEFESELTLDEIARRLHYNPNYLSS 327
:.|::.||.::||||||:.||||||.||:|:|||||||.|||||||||||
BPUM_2661___y 651 IIDQLGAREESQYKNISEKIIHIIHQEFDSDLTLDEIATRLHYNPNYLSS 700
BSNT_04392 328 IFKKEMGISFSEYVSSYRHHMAKSWLAETDMAVKDIAEKLKYKNSQNFIR 377
||:|||.||||||:||||||:||:||.||||:||:|:|||||||.|||||
BPUM_2661___y 701 IFRKEMDISFSEYLSSYRHHVAKNWLVETDMSVKEISEKLKYKNPQNFIR 750
BSNT_04392 378 SFKKLEGITPGNYRQQKRSM 397
|||||||.|||.||.||:.:
BPUM_2661___y 751 SFKKLEGTTPGKYRDQKKGI 770
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