Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04385 and BPUM_2657
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:56
# Commandline: needle
# -asequence pep-align/BSNT_04385.1.24716.seq
# -bsequence pep-align/BPUM_2657___yteT.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04385-BPUM_2657___yteT.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04385-BPUM_2657___yteT.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04385
# 2: BPUM_2657___yteT
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 430
# Identity: 229/430 (53.3%)
# Similarity: 272/430 (63.3%)
# Gaps: 105/430 (24.4%)
# Score: 1276.0
#
#
#=======================================
BSNT_04385 1 ---------------MFIKPLLERFSTHYEITGLLDADPKRFAVCKKKFP 35
||||||.|.|:.||.||||||.|..|:.:|:|:||
BPUM_2657___y 1 MKRVVVCGLSHRAFNMFIKPLTEDFNEHYRITGLLDIDHHRYTLCQKRFP 50
BSNT_04385 36 ELAHVPEFSEDAFDEMMRVSKPDIVIVAGRDDTHVTYIVKSLQWNTDVIT 85
.|..|..|.|:|||:|::.:||||||||||||||||||:::|..:.||||
BPUM_2657___y 51 SLRGVSFFHEEAFDQMVKEAKPDIVIVAGRDDTHVTYILQALDHDLDVIT 100
BSNT_04385 86 EKPMVTTVQDANLVLEAEAKSEGKVTVAFNYRYSPFHRKIKEMILDGKIG 135
|||||||.:||..|:|.|.:|:|||||.|||||:||||||||:||:||||
BPUM_2657___y 101 EKPMVTTAKDAKKVMEKEKESKGKVTVTFNYRYNPFHRKIKELILEGKIG 150
BSNT_04385 136 RVTSVDLNWYIDTYHGASYFKRWNRSRQFSGGLSVHKSTHHFDLVNWWLG 185
|||||:|:|.|||||||||||||||:||||||||||||||||||||||:.
BPUM_2657___y 151 RVTSVELSWLIDTYHGASYFKRWNRTRQFSGGLSVHKSTHHFDLVNWWIN 200
BSNT_04385 186 QNPEEVFAYGALNYYGPDSEWNPLPEEDGRFCGTCRVKEKCHYYSRWHPR 235
|.|::|||||||||||..|.||||..|:.|:||||.||:.|||.:||:||
BPUM_2657___y 201 QKPKQVFAYGALNYYGDQSPWNPLQGEENRYCGTCHVKDTCHYEARWNPR 250
BSNT_04385 236 SSKASIKDDHLEAG-DQSSLYTAYRPDACIFDEEIDIEDTYVAAVKYDGG 284
..:..::|||:|:| :|:..|..||||||||||||||||||||:|.||.|
BPUM_2657___y 251 VERTRVEDDHIESGQEQTQQYANYRPDACIFDEEIDIEDTYVASVVYDQG 300
BSNT_04385 285 ALLSYSIIFSAPYEGYRLTINGTKGRIESNEFHVQNSVCFS--------- 325
||.||||.||||||||||.|||||||||:|||||.:.:.|.
BPUM_2657___y 301 ALFSYSIQFSAPYEGYRLAINGTKGRIETNEFHVPSRIPFQFPEQTISYY 350
BSNT_04385 325 -------------------------------------------------- 325
BPUM_2657___y 351 PMFGAKETIEVVKQPGGHGGGDPLLLTDLFIGKDPLIHYDISAGAEAGAY 400
BSNT_04385 325 ------------------------------ 325
BPUM_2657___y 401 SIALGEGMWRSVAEKRPIDIEELLQKETVS 430
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