Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04380 and BPUM_2652
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:55
# Commandline: needle
# -asequence pep-align/BSNT_04380.1.24716.seq
# -bsequence pep-align/BPUM_2652___opuD.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04380-BPUM_2652___opuD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04380-BPUM_2652___opuD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04380
# 2: BPUM_2652___opuD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 511
# Identity: 241/511 (47.2%)
# Similarity: 271/511 (53.0%)
# Gaps: 212/511 (41.5%)
# Score: 1268.0
#
#
#=======================================
BSNT_04380 0 -------------------------------------------------- 0
BPUM_2652___o 1 MKNVSSVFWIVIAITFVAVMWGAFSPETLQNVTDQIQTYITNDFGWYYLI 50
BSNT_04380 0 -------------------------------------------------- 0
BPUM_2652___o 51 VISLLVGFCLFFIFSPIGKITLGKPGEEPEFGLFSWFAMLFSAGMGIGLV 100
BSNT_04380 0 -------------------------------------------------- 0
BPUM_2652___o 101 FYGAAEPISHYAIQSPTGETETAQAFRDSLRYTFFHWGLHAWAIYAIVAL 150
BSNT_04380 0 -------------------------------------------------- 0
BPUM_2652___o 151 CIAYFKFRKDAPGLISSTLYPVFGNRIHGWIGKTIDCIAVFATVVGVATS 200
BSNT_04380 1 -----------MNYLFGIPNAFIVQLVLIIIVTVLFLLSAWSGLGKGIKY 39
:.|||||||.|:.||::|.|||||||:|||||:||||||
BPUM_2652___o 201 LGLGAAQINGGLTYLFGIPNNFLTQLIIIAIVTVLFLISAWSGIGKGIKY 250
BSNT_04380 40 LSNTNMVLAGLLMLFMLVVGPTVLIMNSFTDSIGQYIQNIVQMSFRLTPN 89
|||:||:.|.:||:|:|..||||.|:||||||||||:.|||||||||:||
BPUM_2652___o 251 LSNSNMIFAAILMIFLLFAGPTVFILNSFTDSIGQYLSNIVQMSFRLSPN 300
BSNT_04380 90 DPEKREWINSWTIFYWAWWISWSPFVGIFIARVSRGRTIREFLIGVLVTP 139
|||||||||.||||||||||||||||||||||||||||||||||||||.|
BPUM_2652___o 301 DPEKREWINGWTIFYWAWWISWSPFVGIFIARVSRGRTIREFLIGVLVAP 350
BSNT_04380 140 CILTFLWFSIFGVSAMDLQQKGTFNVAKLSTETMLFGTLDHYPLTMVTSI 189
.||.|||||||||||||||||...:||.:.|||||||.|:.|||.|:|||
BPUM_2652___o 351 SILVFLWFSIFGVSAMDLQQKNIIDVAGMPTETMLFGVLNQYPLAMITSI 400
BSNT_04380 190 LALILIAVFFITSADSATFVLGMQTSYGSLNPANSVKLSWGIIQSAMAAV 239
|||||||||||||||||||||||||:|||||||||||:||||||||:|||
BPUM_2652___o 401 LALILIAVFFITSADSATFVLGMQTTYGSLNPANSVKISWGIIQSAVAAV 450
BSNT_04380 240 LLYSGGLAALQNTAILAALPFSIVILLMIASLYQSLSKERREIKKAEKLD 289
||:||||.||||||.||||||||||:||:.|||:||:.||:.||:|.|::
BPUM_2652___o 451 LLFSGGLQALQNTAKLAALPFSIVIILMVVSLYKSLNAERKAIKQANKVN 500
BSNT_04380 290 KPRSPRVKKAY 300
||||||||||
BPUM_2652___o 501 KPRSPRVKKA- 510
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