Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04377 and BPUM_2649
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:55
# Commandline: needle
# -asequence pep-align/BSNT_04377___ytgP.1.24716.seq
# -bsequence pep-align/BPUM_2649___ytgP.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04377___ytgP-BPUM_2649___ytgP.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04377___ytgP-BPUM_2649___ytgP.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04377___ytgP
# 2: BPUM_2649___ytgP
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 550
# Identity: 383/550 (69.6%)
# Similarity: 465/550 (84.5%)
# Gaps: 11/550 ( 2.0%)
# Score: 1984.5
#
#
#=======================================
BSNT_04377___ 1 -----MSSKLLRGTFVLTLGTYISRILGMVYLIPFSIMVGATGGALFQYG 45
||:||||||.|||:|||:||||||:||||||.|||||||||||||
BPUM_2649___y 1 MVVKRMSNKLLRGTLVLTIGTYLSRILGMIYLIPFSAMVGATGGALFQYG 50
BSNT_04377___ 46 YNQYTLFLNIATMGFPAAVSKFVSKYNSKGDYETSRKMLKAGMSVMLVTG 95
|||||:||:|||:|||.||||||||||:.|||||:|||.:||||||||||
BPUM_2649___y 51 YNQYTIFLSIATLGFPTAVSKFVSKYNAIGDYETTRKMFRAGMSVMLVTG 100
BSNT_04377___ 96 MIAFFILYLSAPMFAEISLGG-KDNNGLTIDHVVYVIRMVSLALLVVPIM 144
:|||.||||:||:||:|.||| .:..|||:|.||||||||||.|||||||
BPUM_2649___y 101 IIAFSILYLTAPIFAKIQLGGSNETGGLTVDQVVYVIRMVSLGLLVVPIM 150
BSNT_04377___ 145 SLVRGFFQGHQMMGPTAVSQVVEQIVRIIFLLSATFLILKVFNGGLVIAV 194
|||||:||||.||||||||||:||:|||||||:|||:||||.:|||||||
BPUM_2649___y 151 SLVRGYFQGHSMMGPTAVSQVIEQLVRIIFLLTATFIILKVLDGGLVIAV 200
BSNT_04377___ 195 GYATFAALIGAFGGLVVLYIYWNKRKGSLLAMMPNTGPTANLSYKKMFFE 244
|||||||||||||||..||:||.|||..||:|.||||.:::||||:||.|
BPUM_2649___y 201 GYATFAALIGAFGGLFTLYLYWLKRKDRLLSMQPNTGASSDLSYKQMFTE 250
BSNT_04377___ 245 LFSYAAPYVFVGLAIPLYNYIDTNTFNKAMIEAGHQAISQDMLAILTLYV 294
||||||||||||||||:|:||||||.|:|||.:|||.||..:|:|:|||:
BPUM_2649___y 251 LFSYAAPYVFVGLAIPIYSYIDTNTINRAMIASGHQDISTAVLSIVTLYL 300
BSNT_04377___ 295 QKLVMIPVSLATAFGLTLIPTITESFTSGNYKLLNQQINQTMQTILFLII 344
.||||||||||||||||||||||||||:.||||||:||:||||.|||.::
BPUM_2649___y 301 PKLVMIPVSLATAFGLTLIPTITESFTARNYKLLNRQIDQTMQVILFFVL 350
BSNT_04377___ 345 PAVVGISLLSGPTYTFFYGSESLHPELGANILLWYSPVAILFSLFTVNAA 394
||..|||.|:||.|.||| .|:|||:|.:||.||:|||:||||||:|||
BPUM_2649___y 351 PASFGISALAGPVYWFFY--PSVHPEIGMSILFWYAPVALLFSLFTINAA 398
BSNT_04377___ 395 ILQGINKQKFAVVSLVIGVVIKLVLNVPLIKLMQADGAILATALGYIASL 444
|||||||||||:|||::|::||.|||:|||..:|.:|::|||||||.||:
BPUM_2649___y 399 ILQGINKQKFAIVSLLLGIIIKTVLNIPLISWLQGNGSVLATALGYSASI 448
BSNT_04377___ 445 LYGFIMIKRHAGYSYKILVKRTVLMLVLSAIMGIAVKIVQWVLGFFISYQ 494
||.|||||||||||::.:.||.:|:.:|:|||.:...:...::...|||:
BPUM_2649___y 449 LYMFIMIKRHAGYSFRRIFKRFILIGILTAIMAVVAYVTCQLVSQVISYE 498
BSNT_04377___ 495 DGQLQAAIVVVIAAAVGGAVYLYCGYRLGFLQKILGRRLPGFLRKGRHAG 544
.|.:.|.||::|:...||.|||:..|::|.|:::||.|:|.||||..
BPUM_2649___y 499 GGIVNAGIVILISMITGGGVYLFLSYKVGLLERVLGSRMPKFLRKKS--- 545
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