Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04362 and BPUM_2639

See DNA alignment / Visit BSNT_04362 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:54
# Commandline: needle
#    -asequence pep-align/BSNT_04362___ytmP.1.24716.seq
#    -bsequence pep-align/BPUM_2639___ytmP.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04362___ytmP-BPUM_2639___ytmP.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04362___ytmP-BPUM_2639___ytmP.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04362___ytmP
# 2: BPUM_2639___ytmP
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 270
# Identity:     185/270 (68.5%)
# Similarity:   221/270 (81.9%)
# Gaps:           5/270 ( 1.9%)
# Score: 1025.0
# 
#
#=======================================

BSNT_04362___      1 ----MNWLGQLLGSDWEIFPAGGATGDAYYAKHNGQQLFLKRNSSPFLAV     46
                         ||||||:|||:|.|.||||||||||:|.||.|:||||||:||||||
BPUM_2639___y      1 MKIDMNWLGQILGSEWHISPAGGATGDAYFATHNDQKLFLKRNTSPFLAV     50

BSNT_04362___     47 LSAEGIVPKLVWTKRMENGDVITAQHWMTGRELKPKDMSGRPVAELLRKI     96
                     |||||||||||||||||||||||||||::|||||||||:.|||||.||||
BPUM_2639___y     51 LSAEGIVPKLVWTKRMENGDVITAQHWLSGRELKPKDMNDRPVAEQLRKI    100

BSNT_04362___     97 HTSKALLDMLKRLGKEPLNPGALLSQLKQAVFAVQQSSPLIQEGIKYLEE    146
                     ||||.||||||||.|..|:|.::|..|||::...|..:..:...|:|||:
BPUM_2639___y    101 HTSKELLDMLKRLEKHSLDPASILKHLKQSILKEQIDTRDVTRAIQYLEK    150

BSNT_04362___    147 HLHEVHFGEKVVCHCDVNHNNWLLSEDNQLYLIDWDGAMIADPAMDLGPL    196
                     |:..|.|.:|||||||:|||||||:::|||||||||||||||||:|||||
BPUM_2639___y    151 HVEAVQFEDKVVCHCDLNHNNWLLTDENQLYLIDWDGAMIADPAIDLGPL    200

BSNT_04362___    197 LYHYVEKPAWESWLSMYGIELTESLRLRMAWYVLSETITFIAWHKAKGND    246
                     ||||||:..|||||||||..||::||.|||||||:||::|:.|||.|||:
BPUM_2639___y    201 LYHYVEEENWESWLSMYGAPLTDNLRKRMAWYVLAETVSFVVWHKRKGNE    250

BSNT_04362___    247 KEFHDAMEELHILMKRIVD-    265
                     |...:...||..|::|:.. 
BPUM_2639___y    251 KAQQEVKAELSALLQRLNIH    270


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