Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04355 and BPUM_2636

See DNA alignment / Visit BSNT_04355 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:54
# Commandline: needle
#    -asequence pep-align/BSNT_04355___ytnP.1.24716.seq
#    -bsequence pep-align/BPUM_2636___ytnP.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04355___ytnP-BPUM_2636___ytnP.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04355___ytnP-BPUM_2636___ytnP.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04355___ytnP
# 2: BPUM_2636___ytnP
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 293
# Identity:     190/293 (64.8%)
# Similarity:   223/293 (76.1%)
# Gaps:          26/293 ( 8.9%)
# Score: 1030.0
# 
#
#=======================================

BSNT_04355___      1 METMKIGNITLTWLDGGVTHMDGGAMFGVVPKPLWSKKYPVNEKNQIELR     50
                     |||||||::.|.||:||.||||||||||||||||||||||||::||||||
BPUM_2636___y      1 METMKIGDMELFWLNGGDTHMDGGAMFGVVPKPLWSKKYPVNDRNQIELR     50

BSNT_04355___     51 TDPILIQKDGLNIIVDAGIGSGKLTDKQKRNYGVTQESNVKPSLAALGLT    100
                     .|||||:.:||:.:||:||||||||||||||||||:|:.::.|||||||.
BPUM_2636___y     51 CDPILIRWNGLHFLVDSGIGSGKLTDKQKRNYGVTEETKLEESLAALGLQ    100

BSNT_04355___    101 VADIDVIAMTHLHFDHACGLTEYEGERLVSVFPNAVIYTSAVEWDEMRHP    150
                     .||||.:.|||||||||.|||:.|||:||||||.|.|.||.:||||||.|
BPUM_2636___y    101 PADIDYVLMTHLHFDHASGLTKLEGEKLVSVFPQAKIITSKIEWDEMRAP    150

BSNT_04355___    151 NIRSKNTYWKENWEAVAGQVKTFEDTLTITEGITMHHTGGHSDGHSVLIC    200
                     ||||:|||||||||.:|.||..||:::.:.|||.:|||||||:|||:|..
BPUM_2636___y    151 NIRSRNTYWKENWEPIADQVVPFEESIEVIEGIQLHHTGGHSNGHSILTL    200

BSNT_04355___    201 EDAGETAVHMADLMPTHAHRNPLWVLAYDDYPMTSIPQKQKWQAFAAEKD    250
                     ...||||:|:||:||||||:|||||||||||||||||.||||||||.||:
BPUM_2636___y    201 TSQGETAIHLADIMPTHAHKNPLWVLAYDDYPMTSIPAKQKWQAFAEEKN    250

BSNT_04355___    251 AGLFFI---------------MMPNIARFNGMRTEASKIQSSE    278
                     |...|.               :...|.|..|.           
BPUM_2636___y    251 AWYLFYHDAIYRAVKWDEDGQITHEIKRETGR-----------    282


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