Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04345 and BPUM_2629

See DNA alignment / Visit BSNT_04345 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:53
# Commandline: needle
#    -asequence pep-align/BSNT_04345___ytpQ.1.24716.seq
#    -bsequence pep-align/BPUM_2629___ytpQ.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04345___ytpQ-BPUM_2629___ytpQ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04345___ytpQ-BPUM_2629___ytpQ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04345___ytpQ
# 2: BPUM_2629___ytpQ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 270
# Identity:     204/270 (75.6%)
# Similarity:   240/270 (88.9%)
# Gaps:           1/270 ( 0.4%)
# Score: 1077.0
# 
#
#=======================================

BSNT_04345___      1 -MKMTSRKLSDILKQRLQHENRSFLFDREKDTLRVEDQTTKKGITLDLPP     49
                      .|||||:|::.||.||.::|.|..|||||||||:||:.|.|||||:|||
BPUM_2629___y      1 MAKMTSRQLANELKSRLTNDNWSHQFDREKDTLRIEDKQTGKGITLELPP     50

BSNT_04345___     50 IIAKWELKKDEAIDEIVYYVSEAMTAMEGKAQEMTGKETRIYPVIRSTSF     99
                     ||||||:|.||.:|||||||.||::||:|:||.::|||.:||||||||||
BPUM_2629___y     51 IIAKWEVKPDETLDEIVYYVKEALSAMKGEAQHISGKEKQIYPVIRSTSF    100

BSNT_04345___    100 PDKSSEDIPLIYDDHTAETRIYYALDLGKTYRLIDQRMLEKENWTKERIR    149
                     |:.||:.|||::|:||||||||||||||.||||||::||:||||||||||
BPUM_2629___y    101 PEASSDGIPLVFDEHTAETRIYYALDLGSTYRLIDEKMLQKENWTKERIR    150

BSNT_04345___    150 ETAAFNLRSLPTVVKEDTVAGNYFYFFRANDGYDASRILNEAILNEYKQH    199
                     |||:||:|||.||||.|.||||.||||||||||||||:|||:||.||.|.
BPUM_2629___y    151 ETASFNVRSLETVVKMDEVAGNRFYFFRANDGYDASRLLNESILQEYAQK    200

BSNT_04345___    200 AEGELAISVPHQDVLILADIRNESGYDILGQMSMSFFAGGTVPITALSFL    249
                     .||::|||||||||.|:||:.|||||||||||||||||.|||||||||||
BPUM_2629___y    201 IEGQMAISVPHQDVFIIADVCNESGYDILGQMSMSFFASGTVPITALSFL    250

BSNT_04345___    250 YNEGKLEPVFILAKSRPKKD    269
                     |:||||||:|||||||||:.
BPUM_2629___y    251 YDEGKLEPIFILAKSRPKQQ    270


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