Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04344 and BPUM_2628
See
DNA alignment /
Visit
BSNT_04344 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:53
# Commandline: needle
# -asequence pep-align/BSNT_04344___ytpR.1.24716.seq
# -bsequence pep-align/BPUM_2628___ytpR.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04344___ytpR-BPUM_2628___ytpR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04344___ytpR-BPUM_2628___ytpR.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04344___ytpR
# 2: BPUM_2628___ytpR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 201
# Identity: 165/201 (82.1%)
# Similarity: 185/201 (92.0%)
# Gaps: 0/201 ( 0.0%)
# Score: 865.0
#
#
#=======================================
BSNT_04344___ 1 MNAFYNKEGVGDTLLISLQDVTREQLGYEKHGDVVKIFNNETKETTGFNI 50
||.|||.|||||||||||:|||||::|:|..||||:|||.||||||||||
BPUM_2628___y 1 MNVFYNAEGVGDTLLISLKDVTREEVGHETFGDVVRIFNQETKETTGFNI 50
BSNT_04344___ 51 FNASSYLTIDENGPVALSETFVQDVNEILNRNGVEETLVVDLSPKFVVGY 100
||||:|:.|:|||.|.||||.|||:|||||||||.|||.|||||||||||
BPUM_2628___y 51 FNASTYMKIEENGSVPLSETIVQDINEILNRNGVSETLTVDLSPKFVVGY 100
BSNT_04344___ 101 VESKEKHPNADKLSVCKVNVGEETLQIVCGAPNVDQGQKVVVAKVGAVMP 150
|:.||||||||||::|:|:||:||||||||||||||||.|||||||||:|
BPUM_2628___y 101 VKEKEKHPNADKLNICQVDVGDETLQIVCGAPNVDQGQYVVVAKVGAVIP 150
BSNT_04344___ 151 SGLVIKDAELRGVPSSGMICSAKELDLPDAPAEKGILVLEGDYEAGDAFQ 200
|||:|||||||||||||||||||||||||||||||||||||.::||:.||
BPUM_2628___y 151 SGLIIKDAELRGVPSSGMICSAKELDLPDAPAEKGILVLEGSHQAGEPFQ 200
BSNT_04344___ 201 F 201
.
BPUM_2628___y 201 A 201
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.