Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04335 and BPUM_2624

See DNA alignment / Visit BSNT_04335 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:52
# Commandline: needle
#    -asequence pep-align/BSNT_04335___ytxH.1.24716.seq
#    -bsequence pep-align/BPUM_2624___ytxH.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04335___ytxH-BPUM_2624___ytxH.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04335___ytxH-BPUM_2624___ytxH.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04335___ytxH
# 2: BPUM_2624___ytxH
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 157
# Identity:      90/157 (57.3%)
# Similarity:   121/157 (77.1%)
# Gaps:           6/157 ( 3.8%)
# Score: 467.5
# 
#
#=======================================

BSNT_04335___      1 MMSKDGINSKDFLIGTLIGGIIGATTALFLAPKSGKELRDDLGSQAVALR     50
                      ||||||||||||||||||||:||||||||||||||||||||.:||..|:
BPUM_2624___y      1 -MSKDGINSKDFLIGTLIGGIVGATTALFLAPKSGKELRDDLNTQANVLK     49

BSNT_04335___     51 DKTDKMTADAKEKGTQYVSIAKDKTSNITQLVADQSGQIMNKVKDLRDRS    100
                     :|||::|.||||:||:||:|||||||.::||||:||.||::||||:::|:
BPUM_2624___y     50 EKTDRLTTDAKERGTEYVTIAKDKTSELSQLVAEQSNQILDKVKDIKERA     99

BSNT_04335___    101 KSD----KTDSSTAMQDMREEAMQAADETKDQVLQTKEDVKDELKDAQKQ    146
                     ...    |.::..|..|:..||...|||.|.:..:.|.:::|.:||.:::
BPUM_2624___y    100 AGKANHVKNEAENAAADLASEASDVADEAKVRAQEAKSEIEDGIKDVKEK    149

BSNT_04335___    147 AEQLNR-    152
                     .||..: 
BPUM_2624___y    150 VEQSTKG    156


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