Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04331 and BPUM_2620

See DNA alignment / Visit BSNT_04331 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:52
# Commandline: needle
#    -asequence pep-align/BSNT_04331___ccpA.1.24716.seq
#    -bsequence pep-align/BPUM_2620___ccpA.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04331___ccpA-BPUM_2620___ccpA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04331___ccpA-BPUM_2620___ccpA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04331___ccpA
# 2: BPUM_2620___ccpA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 334
# Identity:     279/334 (83.5%)
# Similarity:   309/334 (92.5%)
# Gaps:           1/334 ( 0.3%)
# Score: 1423.0
# 
#
#=======================================

BSNT_04331___      1 MSNITIYDVAREANVSMATVSRVVNGNPNVKPTTRKKVLEAIERLGYRPN     50
                     |:|:||||||||||||||||||||||||||||||||||||||:|||||||
BPUM_2620___c      1 MNNVTIYDVAREANVSMATVSRVVNGNPNVKPTTRKKVLEAIDRLGYRPN     50

BSNT_04331___     51 AVARGLASKKTTTVGVIIPDISSIFYSELARGIEDIATMYKYNIILSNSD    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BPUM_2620___c     51 AVARGLASKKTTTVGVIIPDISSIFYSELARGIEDIATMYKYNIILSNSD    100

BSNT_04331___    101 QNMEKELHLLNTMLGKQVDGIVFMGGNITDEHVAEFKRSPVPIVLAASVE    150
                     ||.:||||||||||||||||||||||||||..|.||||||||||||||||
BPUM_2620___c    101 QNTDKELHLLNTMLGKQVDGIVFMGGNITDVLVEEFKRSPVPIVLAASVE    150

BSNT_04331___    151 EQEETPSVAIDYEQAIYDAVKLLVDKGHTDIAFVSGPMAEPINRSKKLQG    200
                     ||.:||||.|:|||||||:|:|||:|||..||||||||:||||..:||.|
BPUM_2620___c    151 EQAQTPSVNINYEQAIYDSVQLLVEKGHKRIAFVSGPMSEPINSMRKLAG    200

BSNT_04331___    201 YKRALEEANLPFNEQFVAEGDYTYDSGLEALQHLMSLDKKPTAILSATDE    250
                     ||||||||.:.|::..||||||:||||:|:|.||:....||||:::||||
BPUM_2620___c    201 YKRALEEAGIAFDDVLVAEGDYSYDSGIESLAHLLEQSDKPTAVIAATDE    250

BSNT_04331___    251 MALGIIHAAQDQGLSIPEDLDIIGFDNTRLSLMVRPQLSTVVQPTYDIGA    300
                     ||||:||.|||:|:||||||::||||||||||||||||:|||||||||||
BPUM_2620___c    251 MALGVIHGAQDRGVSIPEDLEVIGFDNTRLSLMVRPQLTTVVQPTYDIGA    300

BSNT_04331___    301 VAMRLLTKLMNKEPVEEHIVELPHRIELRKSTKS    334
                     |||||||||||||.|::.|||||||||.|:||| 
BPUM_2620___c    301 VAMRLLTKLMNKEQVDDQIVELPHRIEERQSTK-    333


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