Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03523 and BPUM_2614

See DNA alignment / Visit BSNT_03523 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:03
# Commandline: needle
#    -asequence pep-align/BSNT_03523___yqjZ.1.24716.seq
#    -bsequence pep-align/BPUM_2614.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03523___yqjZ-BPUM_2614.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03523___yqjZ-BPUM_2614.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03523___yqjZ
# 2: BPUM_2614
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 114
# Identity:      43/114 (37.7%)
# Similarity:    60/114 (52.6%)
# Gaps:          15/114 (13.2%)
# Score: 216.0
# 
#
#=======================================

BSNT_03523___      1 MDFLSKTPEPPYYAVIFSSVKSE-NDTGYGETAERMVSLAADQPGFLGVE     49
                      ...::||..|||||||:|.::. ....|...|::|..||.:..||||:|
BPUM_2614          1 -MLFTQTPATPYYAVIFTSKRTNVEQKEYAAAAQKMEELAKELDGFLGIE     49

BSNT_03523___     50 SVREADGRGITVSYWDSMDAINHWKHHTEHQAAKEKGKSVWYESYAVRVA     99
                     |||:..|.|||||||:|:.||..||.||.||..::|||.:..:.......
BPUM_2614         50 SVRDEHGVGITVSYWNSLAAIKEWKAHTAHQRVQKKGKRIGMKPIQPEFV     99

BSNT_03523___    100 KIERQRLFQENTND    113
                     :             
BPUM_2614        100 R-------------    100


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