Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03523 and BPUM_2614
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:03
# Commandline: needle
# -asequence dna-align/BSNT_03523___yqjZ.1.24716.seq
# -bsequence dna-align/BPUM_2614.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03523___yqjZ-BPUM_2614.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03523___yqjZ-BPUM_2614.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03523___yqjZ
# 2: BPUM_2614
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 387
# Identity: 202/387 (52.2%)
# Similarity: 202/387 (52.2%)
# Gaps: 129/387 (33.3%)
# Score: 499.0
#
#
#=======================================
BSNT_03523___ 1 ATGGATTTTTTA-TCAAAAACACCTGAGCCTCCTTACTATGCAGTCATTT 49
||| ||.|||| || |||||||||...|.|||||.|||||.||.||||
BPUM_2614 1 ATG--TTATTTACTC--AAACACCTGCAACACCTTATTATGCCGTGATTT 46
BSNT_03523___ 50 TTTCTTCTGTCAAAAGCGA--AAATGACACAGGATATGGAGAAACAGCGG 97
|..|.|| |||.||| |||||.| |
BPUM_2614 47 TCACATC-----AAAACGAACAAATGTC---------------------G 70
BSNT_03523___ 98 AGCGGATGGTAT-CGCTTGCGGC----------------GGATCAGC--- 127
|||.||.||.|| ||| |||||| |.||.|||
BPUM_2614 71 AGCAGAAGGAATACGC-TGCGGCTGCTCAAAAAATGGAAGAATTAGCGAA 119
BSNT_03523___ 128 ----CT----GGATTTTTAGGCGTGGAAAGCGTACG---TGAA----GCG 162
|| ||.|||.|.||..|.|||||.|||.| |||| ||
BPUM_2614 120 AGAACTAGACGGCTTTCTTGGAATAGAAAGTGTAAGAGATGAACATGGC- 168
BSNT_03523___ 163 GATGGAAGGGGCATCACAGTTTCCTATTGGGA--CAGTATGGACGCAATT 210
|.|||| |||||.|||||.||.|||.| ||.|| |..||.||.
BPUM_2614 169 GTTGGA------ATCACTGTTTCTTACTGGAATTCATTA--GCAGCCATC 210
BSNT_03523___ 211 AACCATTGG-AAGCATCACACTGAACATCAAGCAG----CAAAAGAAAAA 255
||..|.||| ||||| ||.||.|.||||| ||| | |||| ||||.
BPUM_2614 211 AAAGAATGGAAAGCA-CATACAGCACATC-AGC-GTGTTCAAA--AAAAG 255
BSNT_03523___ 256 GGAAAAAGCGTTTGGTACGAGTCGTATGCAGTCCGCGTCGCAAAAATCGA 305
|||||||| |.||||||.||..|.|||.||..||| ||.|.|.
BPUM_2614 256 GGAAAAAG-GATTGGTATGAAGCCTATACAACCCG--------AATTTGT 296
BSNT_03523___ 306 AAGACAGCGGCTGTTTCAGGAGAACACGAATGATTGA 342
|||..||
BPUM_2614 297 AAGGTAG------------------------------ 303
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