Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03885 and BPUM_2612
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:24
# Commandline: needle
# -asequence pep-align/BSNT_03885___yrdC.1.24716.seq
# -bsequence pep-align/BPUM_2612___yrdC.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03885___yrdC-BPUM_2612___yrdC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03885___yrdC-BPUM_2612___yrdC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03885___yrdC
# 2: BPUM_2612___yrdC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 188
# Identity: 132/188 (70.2%)
# Similarity: 158/188 (84.0%)
# Gaps: 1/188 ( 0.5%)
# Score: 716.0
#
#
#=======================================
BSNT_03885___ 1 MEEKKKALIIVDVQKAFDDKKWGERNNVKAEENISKILKLWREKGWTVIY 50
|:..:||||||||||||:.:|||||||::||.|||::|:.||||||.||:
BPUM_2612___y 1 MQTSQKALIIVDVQKAFEHEKWGERNNLEAENNISQLLRFWREKGWKVIH 50
BSNT_03885___ 51 IQHTSDKPHSLFHPKNEGFAIKEIVKPMDEEVIITKTVNSSFIGTNLEEF 100
||||:|.|.|||||.|||...|:|.:|::||.:|.|.||||||||||||.
BPUM_2612___y 51 IQHTADNPDSLFHPANEGHLFKDIARPLEEETVIQKKVNSSFIGTNLEEQ 100
BSNT_03885___ 101 LKLNEITTVVITGLTTPHCVSTTTRMSGNLGFDTYLISDATAAFGMRDQN 150
|:.|.:.||||.|||||||||||||||||||||||||||||||||:.||.
BPUM_2612___y 101 LRSNHMDTVVIAGLTTPHCVSTTTRMSGNLGFDTYLISDATAAFGLTDQT 150
BSNT_03885___ 151 DTYYDAATIHNISLATLHDEFATILTTDQLINDFIKTH 188
.||:|..|||.:|||||||||||:|||:|||.::.|:
BPUM_2612___y 151 GTYFDPETIHRLSLATLHDEFATVLTTEQLITNWAKS- 187
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