Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_04313 and BPUM_2607

See DNA alignment / Visit BSNT_04313 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:51
# Commandline: needle
#    -asequence pep-align/BSNT_04313___hisJ.1.24716.seq
#    -bsequence pep-align/BPUM_2607___hisK.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04313___hisJ-BPUM_2607___hisK.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04313___hisJ-BPUM_2607___hisK.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04313___hisJ
# 2: BPUM_2607___hisK
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 271
# Identity:     169/271 (62.4%)
# Similarity:   209/271 (77.1%)
# Gaps:           3/271 ( 1.1%)
# Score: 921.0
# 
#
#=======================================

BSNT_04313___      1 MQKRDGHIHTPFCPHGSNDTLRQYAEEALKKGFESITFTEHAPLPPSFTD     50
                     |.|:|.|:||||||||:.|:...|.|:|:||||:||||||||||||||.|
BPUM_2607___h      1 MLKQDAHLHTPFCPHGTPDSFHSYIEKAIKKGFDSITFTEHAPLPPSFHD     50

BSNT_04313___     51 PTPLKDSAMAQASLERYIHEISGLKKEYRGQLSIRTGLEVDYIAEFEDEI    100
                     |||.:||||....||.||.::..||:||:|||.::||||||||.|:|:|.
BPUM_2607___h     51 PTPAQDSAMKLQELESYITKLDQLKQEYKGQLIVKTGLEVDYIKEYEEET    100

BSNT_04313___    101 TLFLDTYGPYLDDSILSVHFLRTDSSYLCLDYDEHTFKELISACGSIEAV    150
                     :.|||.|||.|||||||||||.....|:|||:|||.|::|||..||||.|
BPUM_2607___h    101 SAFLDCYGPELDDSILSVHFLPAGDDYICLDFDEHAFQQLISLYGSIEQV    150

BSNT_04313___    151 YEQYYRSIYSSIVASLGVYKPKRVGHITLVQKFIKLFPYSMSEHIRGLVS    200
                     |:.||..|:|||::|||.|||.|:|||||||||.:|||:.|:..:...|:
BPUM_2607___h    151 YQSYYDQIHSSILSSLGRYKPNRIGHITLVQKFKQLFPFEMTPALCQKVT    200

BSNT_04313___    201 LCLNAIEENGMELDFNTSGLRKTYAGGIYIEDWMLNEAKQKKIPLVFGSD    250
                     |||....:.||.|||||||||||||..||::.||::.||||||||:||||
BPUM_2607___h    201 LCLEETAKKGMSLDFNTSGLRKTYARSIYLDQWMIDLAKQKKIPLIFGSD    250

BSNT_04313___    251 AHQAGDVGYAYEAFLERC---    268
                     ||||.|:||||:.|.:..   
BPUM_2607___h    251 AHQAEDLGYAYDQFEDIMSFK    271


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.