Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home About Browser Genes Download Publications

Amino acid alignment: BSNT_01852 and BPUM_2599

See DNA alignment / Visit BSNT_01852 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:22
# Commandline: needle
#    -asequence pep-align/BSNT_01852___yisU.1.24716.seq
#    -bsequence pep-align/BPUM_2599___yisU.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01852___yisU-BPUM_2599___yisU.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01852___yisU-BPUM_2599___yisU.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01852___yisU
# 2: BPUM_2599___yisU
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 205
# Identity:     118/205 (57.6%)
# Similarity:   148/205 (72.2%)
# Gaps:           3/205 ( 1.5%)
# Score: 621.0
# 
#
#=======================================

BSNT_01852___      1 -MNAIIHGIVLAFGLILPLGVQNVFIFQQGAWQKHIWRALPAVISASVCD     49
                      ..||:||||||||||||||.||||:|||||.|..:::|||.||:|::||
BPUM_2599___y      1 MFIAIVHGIVLAFGLILPLGAQNVFVFQQGALQPRLYQALPVVITAALCD     50

BSNT_01852___     50 TLLIVLAVAGVSVIVQELPVFETVMMAGGFLFLLYMGWVTWNSRPNTSQN     99
                     ||||.|||.||||:|..:|:.:..:...||.||:||||..||:..:|...
BPUM_2599___y     51 TLLIALAVIGVSVVVFTIPMLQMCLYLIGFCFLVYMGWSVWNTNSSTGAK    100

BSNT_01852___    100 EKHTFTP-KKQAAFAAAVSLLNPHAILDTIGVIGTSSLQYSGLEKWLFMA    148
                     ||..|.| :||..||.:||||||||||||||||||:||||:|.|||.|..
BPUM_2599___y    101 EKQEFMPARKQILFACSVSLLNPHAILDTIGVIGTNSLQYNGAEKWAFTL    150

BSNT_01852___    149 ACIAVSWIWFISLAIAGRLFQTIDTSGRLMLIVNKCSAAVMWAAAGYFGV    198
                     |||.|||:|||.||:.|::...:||:|:.|..:||.||.::|..|.|.|.
BPUM_2599___y    151 ACIIVSWLWFIGLALLGKMLGKLDTNGKWMNRINKASAVMIWLVALYIGY    200

BSNT_01852___    199 SLFCN    203
                     .|.. 
BPUM_2599___y    201 QLIV-    204


#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.