Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04428 and BPUM_2593

See DNA alignment / Visit BSNT_04428 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:59
# Commandline: needle
#    -asequence pep-align/BSNT_04428___ytsB.1.24716.seq
#    -bsequence pep-align/BPUM_2593___ytsB.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04428___ytsB-BPUM_2593___ytsB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04428___ytsB-BPUM_2593___ytsB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04428___ytsB
# 2: BPUM_2593___ytsB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 334
# Identity:     190/334 (56.9%)
# Similarity:   247/334 (74.0%)
# Gaps:           0/334 ( 0.0%)
# Score: 996.0
# 
#
#=======================================

BSNT_04428___      1 MIKAFLIERRSWIAAFLFQQALMLFIVFVDPSISFGNVLYMVYLCILFFI     50
                     |::|||.||||||..||..|.|:||:.|:|.:|...::.|:|.|...|.|
BPUM_2593___y      1 MLQAFLKERRSWILFFLSLQLLILFVAFLDTTIPMASLFYIVLLSTFFMI     50

BSNT_04428___     51 IFLWFRYRKETAFYKSLKTWENNLDVTAINEPETPFEAMVERSIAGQTEH    100
                     :||:||||||||:|:.||.|::::|......|.:|||.:|..:.:.|.:.
BPUM_2593___y     51 VFLFFRYRKETAYYERLKEWDDHIDHQMRLTPSSPFEQLVHDATSEQIDR    100

BSNT_04428___    101 LKQTAARHRLALENEKDELMAWIHEVKTPLTAMHLIIDRMEEKALKSQLS    150
                     .::.||..::|||.|||||::||||||||||||||:|||:.|:.|||.::
BPUM_2593___y    101 YRKMAAEQQIALEEEKDELLSWIHEVKTPLTAMHLMIDRLTEQPLKSNMT    150

BSNT_04428___    151 YEWLRIHLLLDQQLHQKRISFIENDLSVEFIQLQPLIFKEIKDLQSWCIQ    200
                     |||||||||||.|||:.||..|||||.:|.:.||.::.||||.|||||:|
BPUM_2593___y    151 YEWLRIHLLLDAQLHRSRIRHIENDLFIEQLDLQSILAKEIKALQSWCMQ    200

BSNT_04428___    201 KGIGFDIKLEAKEVLSDAKWLAFIIRQLLTNAVKYSEASEIEIKSFQKGE    250
                     |||||::.||.:.||||||||:|||||:||||||||.:|:|.|:|....:
BPUM_2593___y    201 KGIGFELTLEERHVLSDAKWLSFIIRQVLTNAVKYSHSSDIAIESKHIND    250

BSNT_04428___    251 QTQLQVKDCGRGIDPKDVPRIFDKGFTSTTDHHDQASTGMGLYLAKKAAA    300
                     |..|.:.|.||||||:|:.|||:||||||..|:|.|||||||||.||.|.
BPUM_2593___y    251 QVMLTITDQGRGIDPRDLSRIFEKGFTSTRHHNDTASTGMGLYLTKKGAD    300

BSNT_04428___    301 PLLIHIDVESEFGAGTVFTLTFPIRNQFEHVISV    334
                     .|.|.|:|.|....||.||..||.:|.|.|:.|:
BPUM_2593___y    301 ALHIKIEVNSTIDQGTTFTFIFPKKNDFVHIASM    334


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