Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_04429 and BPUM_2592

See DNA alignment / Visit BSNT_04429 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:59
# Commandline: needle
#    -asequence pep-align/BSNT_04429___ytsA.1.24716.seq
#    -bsequence pep-align/BPUM_2592___ytsA.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04429___ytsA-BPUM_2592___ytsA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04429___ytsA-BPUM_2592___ytsA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04429___ytsA
# 2: BPUM_2592___ytsA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 260
# Identity:     172/260 (66.2%)
# Similarity:   197/260 (75.8%)
# Gaps:          31/260 (11.9%)
# Score: 945.0
# 
#
#=======================================

BSNT_04429___      1 -----------------------------MFKLLLIEDDESLFHEIKDRL     21
                                                  :||:||||||.:||.|||:||
BPUM_2592___y      1 MLFSCLLLAAAPFFRYNYIQANTKSVVLVLFKILLIEDDTTLFQEIKERL     50

BSNT_04429___     22 TGWSYDVYGIQDFSQVLQEFAAVNPDCVIIDVQLPKFDGFHWCRQIRSRS     71
                     ..||||||||.||.||:|||.:|.||.||||:||||:|||||||.||..|
BPUM_2592___y     51 VNWSYDVYGIHDFQQVMQEFTSVQPDLVIIDIQLPKYDGFHWCRMIRHHS    100

BSNT_04429___     72 NVPILFLSSRDHPADMVMSMQLGADDFIQKPFHFDVLIAKIQAMFRRVHH    121
                     ||||:||||||||||||||||||||||:||||||||||||:.|:.||||.
BPUM_2592___y    101 NVPIIFLSSRDHPADMVMSMQLGADDFVQKPFHFDVLIAKVSAVLRRVHD    150

BSNT_04429___    122 YNTEPNTIKTWCGAAVDAEQNLVSNDKGSVELTKNEMFILKQLIEQKNKI    171
                     ||.||.::|.||||.:|.|:|.|:||.|.|||||||:||||:||:.||.|
BPUM_2592___y    151 YNAEPASLKVWCGATIDLEKNTVTNDHGEVELTKNELFILKELIQHKNHI    200

BSNT_04429___    172 VSREELIRSLWNDERFVSDNTLTVNVNRLRKKLDALQLGAYIETKVGQGY    221
                     ||||.||::||.||||||||||||||||||||||.:.||.||||||||||
BPUM_2592___y    201 VSRESLIQALWEDERFVSDNTLTVNVNRLRKKLDEISLGTYIETKVGQGY    250

BSNT_04429___    222 IAKEEDKFYD    231
                     :|||:|..  
BPUM_2592___y    251 LAKEKDDQ--    258


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.