Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05988 and BPUM_2587
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:31
# Commandline: needle
# -asequence pep-align/BSNT_05988___deaD.1.24716.seq
# -bsequence pep-align/BPUM_2587.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05988___deaD-BPUM_2587.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05988___deaD-BPUM_2587.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05988___deaD
# 2: BPUM_2587
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 481
# Identity: 280/481 (58.2%)
# Similarity: 368/481 (76.5%)
# Gaps: 3/481 ( 0.6%)
# Score: 1490.0
#
#
#=======================================
BSNT_05988___ 1 --MSHFKNYQISHDILRALEGLGYTEPTKVQQSVIPAALERKDLVVKSQT 48
:..|..|.:|.|:.:||:.|.:..||.||...:..|..::||:|||||
BPUM_2587 1 MTLQQFDQYPLSDDLKQALKALHFHTPTPVQHETLSVAFSKQDLIVKSQT 50
BSNT_05988___ 49 GSGKTASFGIPLCELADWDENKPQALILTPTRELAVQVKEDITNIGRFKR 98
||||||::|:|:||:.||.|||||||||.||||||:|||:|:|::||.||
BPUM_2587 51 GSGKTAAYGLPICEMVDWAENKPQALILVPTRELAMQVKQDLTSLGRLKR 100
BSNT_05988___ 99 IKATAVFGKSSFDKQKAELKQKSHIVVGTPGRVLDHIEKGTLPLDRLSYL 148
|||.|:|||:.|..||.||.||:|||.|||||||||:|||||.|:.|.:.
BPUM_2587 101 IKAAAIFGKAPFQAQKIELAQKNHIVCGTPGRVLDHLEKGTLSLENLKFF 150
BSNT_05988___ 149 VIDEADEMLNMGFIEQVEAIIKHLPTERTTMLFSATLPEDIEKLSRQYMQ 198
|:||||||||||||:||.:||::||.:|.:||||||:.::::|||.|::|
BPUM_2587 151 VLDEADEMLNMGFIDQVSSIIQYLPPKRMSMLFSATMSDEMKKLSEQFLQ 200
BSNT_05988___ 199 NPEHIEIKAAGLTTRNIEHAVIQVREENKFSLLKDVLMTENPDSCIIFCR 248
:|:.|||.....:...|.|.||:..||.|||||:..::.||||||||||.
BPUM_2587 201 SPKVIEIAREETSVPQITHTVIETEEEAKFSLLQRTIVIENPDSCIIFCN 250
BSNT_05988___ 249 TKEHVNQLTDELDDLGYPCDKIHGGMIQEDRFDVMNEFKRGEYRYLVATD 298
|::.||:||.:||:...|||||||||.|||||.||:|||.||:|||:|||
BPUM_2587 251 TQDRVNELTMKLDEWDVPCDKIHGGMRQEDRFAVMDEFKNGEFRYLIATD 300
BSNT_05988___ 299 VAARGIDIENISLVINYDLPVEKESYVHRTGRTGRAGNKGKAISFVTAFE 348
:||||||:.:::.||:||||.|||.|:||||||||||..||.|:|:|...
BPUM_2587 301 IAARGIDVSDMTHVIHYDLPYEKERYIHRTGRTGRAGKSGKTIAFMTRNA 350
BSNT_05988___ 349 KRFLADIEEYIGFEIQKIEAPSQEEVARKKPEFLAKLNDRPESKKDKSEE 398
|..:.:::|..|.:.:....|::|:..:....|..|: :.|..|::|...
BPUM_2587 351 KPLIDELKEEAGIDFKTQPYPTKEDAEQHVERFEEKI-ETPIQKENKQAG 399
BSNT_05988___ 399 LNKDIMKLYFNGGKKKKIRAVDFVGTIAKIDGVSADDIGIITIMDNASYV 448
:.|||||||||||||||:|||||||||||||||:.||||||||.|..:||
BPUM_2587 400 VEKDIMKLYFNGGKKKKLRAVDFVGTIAKIDGVAFDDIGIITIQDTKTYV 449
BSNT_05988___ 449 EILNGKGPHVLKVMKNTTVKGKQLKVNKANK 479
:|||||||.||..|::||:|||||||::|..
BPUM_2587 450 DILNGKGPLVLNAMRHTTIKGKQLKVHEARS 480
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