Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04302 and BPUM_2586

See DNA alignment / Visit BSNT_04302 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:50
# Commandline: needle
#    -asequence pep-align/BSNT_04302___ppnK.1.24716.seq
#    -bsequence pep-align/BPUM_2586___ppnK.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04302___ppnK-BPUM_2586___ppnK.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04302___ppnK-BPUM_2586___ppnK.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04302___ppnK
# 2: BPUM_2586___ppnK
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 267
# Identity:     201/267 (75.3%)
# Similarity:   233/267 (87.3%)
# Gaps:           0/267 ( 0.0%)
# Score: 1060.0
# 
#
#=======================================

BSNT_04302___      1 MTDQRRNVYFFHKQDQETNEQARSLTQLAEEHGFTVVNQHSDANIIASIG     50
                     |||.||||:||:|:|.|.:....||.:||.:.||.||.:..||:||||||
BPUM_2586___p      1 MTDNRRNVFFFYKKDHELDGHISSLEKLATDQGFQVVKRAEDAHIIASIG     50

BSNT_04302___     51 GDGTFLQAVRKTNFRDDCLYVGITKKGKAHLYCDFHSDEREKMVDAMTFE    100
                     ||||||||||||||||||||||::|...:||||||..:..:||:|||..|
BPUM_2586___p     51 GDGTFLQAVRKTNFRDDCLYVGVSKTENSHLYCDFSLEHFDKMIDAMNTE    100

BSNT_04302___    101 QIEVRKYPLIEVTVDNASPFHCLNEVSIRSSIIKTFVMDVLIDDLHFETF    150
                     ||||||||:|:|:||:.:.||||||:|||||||||||:||.|||.|||||
BPUM_2586___p    101 QIEVRKYPIIDVSVDSTNQFHCLNELSIRSSIIKTFVIDVYIDDFHFETF    150

BSNT_04302___    151 RGDGMIISTPTGSTAYNKSVAGAVVDPLLPCMQVSELASLNNNTYRTLGS    200
                     ||||||||||||||||||||.||||||:||||||:||||||||:|||||:
BPUM_2586___p    151 RGDGMIISTPTGSTAYNKSVNGAVVDPMLPCMQVTELASLNNNSYRTLGA    200

BSNT_04302___    201 PFVLSSDRKLTLRVVQDGNEHPIIGLDNEALSTRNVKTIEIKLSNKKIKT    250
                     ||:|||||||||:||||||:|||||||||||.|::||.|:|.||.|.|||
BPUM_2586___p    201 PFILSSDRKLTLKVVQDGNDHPIIGLDNEALGTKHVKQIDIGLSGKVIKT    250

BSNT_04302___    251 VKLKDNSFWEKVKRTFL    267
                     |||||||:||||||.||
BPUM_2586___p    251 VKLKDNSYWEKVKRRFL    267


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