Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04302 and BPUM_2586

See Amino acid alignment / Visit BSNT_04302 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:50
# Commandline: needle
#    -asequence dna-align/BSNT_04302___ppnK.1.24716.seq
#    -bsequence dna-align/BPUM_2586___ppnK.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04302___ppnK-BPUM_2586___ppnK.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04302___ppnK-BPUM_2586___ppnK.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04302___ppnK
# 2: BPUM_2586___ppnK
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 851
# Identity:     567/851 (66.6%)
# Similarity:   567/851 (66.6%)
# Gaps:          94/851 (11.0%)
# Score: 1839.0
# 
#
#=======================================

BSNT_04302___      1 ATGACCGATCAA-CGCCGTAATGTTTATTTTTTTCACAAACAGGATCAGG     49
                     |||||.|| ||| ||.||.|||||.|.|||.|||.|||||.|.|||||.|
BPUM_2586___p      1 ATGACAGA-CAATCGTCGCAATGTATTTTTCTTTTACAAAAAAGATCATG     49

BSNT_04302___     50 AAACGAACGAAC-----------------AAGCCCGCTCGTTAACACAAT     82
                     ||..|.|.|.||                 ||||.||||       ||   
BPUM_2586___p     50 AATTGGATGGACACATTTCTTCTCTGGAGAAGCTCGCT-------AC---     89

BSNT_04302___     83 TGGCGGAAGAGCATGGATTTACCGTTGTGAACCAGCACTCA---GACGCT    129
                            .||.||.||.|||...||.||   |.|||...||   ||.||.
BPUM_2586___p     90 -------CGATCAAGGCTTTCAAGTCGT---CAAGCGTGCAGAGGATGCC    129

BSNT_04302___    130 AATATTATCGCTAGCATTGGCGGGGACGGCACATTTTTGCAGGCAGTCAG    179
                     .|||||||.|||...||||||||.||.|||||||||.|.||.||||||.|
BPUM_2586___p    130 CATATTATTGCTTCAATTGGCGGAGATGGCACATTTCTTCAAGCAGTCCG    179

BSNT_04302___    180 AAAGACGAATTTTCGTGACGACTGCTTGTACGTCGGCATTACCAAAAA-G    228
                     .||.|||||.||.||.||.||||||||.||.||.|| ..||.|||||| .
BPUM_2586___p    180 TAAAACGAACTTCCGGGATGACTGCTTATATGTAGG-GGTATCAAAAACA    228

BSNT_04302___    229 GGGAAAGCTCATTTATATTGCGACTTT---------CATAGTGATGAGCG    269
                     |.|||..|.|||.||||.|||||.|||         |||..||||     
BPUM_2586___p    229 GAGAATTCGCATCTATACTGCGATTTTTCATTAGAACATTTTGAT-----    273

BSNT_04302___    270 AGAAAAAATGGTCGATGCAATGACGTTTGAACAAATTGAAGTGAGAAAAT    319
                         ||||||.|.|||||.||||....||||||.||||||||||||||||
BPUM_2586___p    274 ----AAAATGATTGATGCCATGAACACTGAACAGATTGAAGTGAGAAAAT    319

BSNT_04302___    320 ATCCGCTGATTGAAG-------TGACAGTGGATAAC--GCCAGTCCTTTT    360
                     |.|||.|.||.||.|       |||||||     ||  .||||    ||.
BPUM_2586___p    320 ACCCGATCATCGATGTAAGCGTTGACAGT-----ACCAACCAG----TTC    360

BSNT_04302___    361 CATTGCCTAAACGAGGTTTCCATCCGTTCAAGCATCATTAAAACCTTTGT    410
                     ||||||.||||.||..|.||.|||||.|||||||||||||||||.|||||
BPUM_2586___p    361 CATTGCTTAAATGAACTGTCGATCCGCTCAAGCATCATTAAAACATTTGT    410

BSNT_04302___    411 GATGGACGTGCTGATTGACGATCTGCACTTTGAAACGTTTAGAGGTGACG    460
                     |||.||.|||...||.||.|||.|.|||||||||||.||||||||.||||
BPUM_2586___p    411 GATCGATGTGTATATAGATGATTTCCACTTTGAAACATTTAGAGGAGACG    460

BSNT_04302___    461 GAATGATCATCTCAACGCCTACAGGCAGCACCGCCTATAACAAGTCTGTT    510
                     |||||||.||.||.||.||.||.|||...||.|||||.||.||.||.||.
BPUM_2586___p    461 GAATGATTATTTCTACTCCGACTGGCTCAACAGCCTACAATAAATCGGTA    510

BSNT_04302___    511 GCAGGAGCGGTTGTTGATCCGCTGCTCCCATGCATGCAGGTATCTGAGCT    560
                     ...||.||.||.|||||||||.||||.|||||.|||||.||..|.|||||
BPUM_2586___p    511 AACGGTGCCGTGGTTGATCCGATGCTTCCATGTATGCAAGTTACAGAGCT    560

BSNT_04302___    561 TGCTTCTCTTAACAATAACACCTACCGGACACTCGGCTCGCCATTTGTCC    610
                     |||.||.||.|||||.|||.|.|||||.||||||||..||||.||..||.
BPUM_2586___p    561 TGCATCGCTAAACAACAACTCGTACCGTACACTCGGGGCGCCTTTCATCT    610

BSNT_04302___    611 TCAGCTCTGACCGAAAGCTGACCCTTCGTGTGGTGCAGGACGGCAACGAA    660
                     |.|||..|||.||.|||||.||.||....||.|||||.|||||.|||||.
BPUM_2586___p    611 TAAGCAGTGATCGCAAGCTAACGCTGAAGGTTGTGCAAGACGGAAACGAC    660

BSNT_04302___    661 CACCCAATCATC-GGCTTGGACAATGAAGCACTCAGCACGAGAAATGTGA    709
                     ||.||.||.||| ||||| ||.||.|||||.||..||||.|.|.|.||.|
BPUM_2586___p    661 CATCCGATTATCGGGCTT-GATAACGAAGCGCTTGGCACAAAACACGTCA    709

BSNT_04302___    710 AAACGATCGAAATCAAACTGTCTAATAAGAAA----ATCAAAACAGTCAA    755
                     ||...|||||.||....||.||    |.||||    ||.||||||||.||
BPUM_2586___p    710 AACAAATCGACATTGGCCTTTC----AGGAAAAGTCATTAAAACAGTGAA    755

BSNT_04302___    756 ACTAAAGGACAATTCATTTTGGGAAAAAGTGAAGCGTACTTT--TTTATA    803
                     |.||||.|||||.||.|..|||||||||||.||.||.|..||  ||||. 
BPUM_2586___p    756 ATTAAAAGACAACTCCTACTGGGAAAAAGTAAAACGCAGATTCCTTTAA-    804

BSNT_04302___    804 G    804
                      
BPUM_2586___p    804 -    804


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_04302 and BPUM_2586

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
