Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04298 and BPUM_2584
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:50
# Commandline: needle
# -asequence pep-align/BSNT_04298___yteJ.1.24716.seq
# -bsequence pep-align/BPUM_2584___yteJ.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04298___yteJ-BPUM_2584___yteJ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04298___yteJ-BPUM_2584___yteJ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04298___yteJ
# 2: BPUM_2584___yteJ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 175
# Identity: 94/175 (53.7%)
# Similarity: 126/175 (72.0%)
# Gaps: 13/175 ( 7.4%)
# Score: 518.5
#
#
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BSNT_04298___ 1 MDATYEELERN---DIKGPQEAEQL---THAYAGFWVRFWAFLLDWLVIW 44
||:|::|:..: :...|..|::. ..|:||||:|||||:|||||:|
BPUM_2584___y 1 MDSTFDEVTESRSQEESNPALAKRAVIEAQAFAGFWIRFWAFILDWLVVW 50
BSNT_04298___ 45 GLNHLLVSPLFTVLDLPKTSGMFTFSAYSVTTLIVYLAYFALMTKYFRQT 94
|:|||.|||:|::....|..|. ||.:||||.||:|.|||:|||.||||
BPUM_2584___y 51 GVNHLTVSPIFSLFGWSKGGGW--FSPFSVTTTIVFLLYFAIMTKIFRQT 98
BSNT_04298___ 95 LGKMVFGLKVVSVKRDSKLTWSTVIFREVVGRYIDKIWILYIVVAFSPTK 144
|||||||:||||::.:.||.|..:.|||:|||||:.:::||.:|.|:|.|
BPUM_2584___y 99 LGKMVFGIKVVSLQPEKKLAWDVIFFREIVGRYINTLFVLYAIVGFTPKK 148
BSNT_04298___ 145 QGIHDYIADTTVVHEKLYRK----- 164
||:|||.|||.||||.||.|
BPUM_2584___y 149 QGVHDYFADTVVVHEHLYEKTEANV 173
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